RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PNMTP11086 282 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 COX6A1P12074 109 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CHMP24386 653 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 HLCSP50747 726 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 COPZ1P61923 177 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RPS15P62841 145 aaKnown RBP11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PRKCDQ05655 676 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CD47Q08722 323 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MAD2L1BPQ15013 274 aaPredicted RBP11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLX4IPQ5VYV7 408 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 FAAH2Q6GMR7 532 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 WBP2NLQ6ICG8 309 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TMPRSS11FQ6ZWK6 438 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NDUFAF7Q7L592 441 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MRGPREQ86SM8 312 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF786Q8N393 782 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF614Q8N883 585 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 POGLUT1Q8NBL1 392 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TSPAN14Q8NG11 270 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TMEM239Q8WW34 195 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TMCO6Q96DC7 493 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ARSGQ96EG1 525 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ADOQ96SZ5 270 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SECISBP2Q96T21 854 aaKnown RBP11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CCNB1IP1Q9NPC3 277 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PLCXD1Q9NUJ7 323 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SELENONQ9NZV5 590 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NDUFA13Q9P0J0 144 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MYOTQ9UBF9 498 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RPS6KB2Q9UBS0 482 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TCFL5Q9UL49 500 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 A0A1B0GWA3 101 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SH3D21A4FU49 640 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 A6NHS1 94 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TMEM200CA6NKL6 621 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SOCS6O14544 535 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ICOSLGO75144 302 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 BCAS1O75363 584 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SEC24DO94855 1032 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CLIC3O95833 236 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CLPTM1O96005 669 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 HPP00738 406 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FTH1P19P0C7X4 201 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GKN3PP0CG01 181 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PRG2P13727 222 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CRHBPP24387 322 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 EVI2BP34910 448 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 RPL5P46777 297 aaKnown RBP11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NR1H2P55055 460 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DLX5P56178 289 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 IL5RAQ01344 420 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 IL1RL1Q01638 556 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CHAF1BQ13112 559 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CDK5R2Q13319 367 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PTGES3Q15185 160 aaKnown RBP11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ALG10BQ5I7T1 473 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SLC25A30Q5SVS4 291 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 BROXQ5VW32 411 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 C12orf73Q69YU5 71 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DHRS13Q6UX07 377 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NKAIN4Q8IVV8 208 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CDK20Q8IZL9 346 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NLGN4XQ8N0W4 816 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NLGN4YQ8NFZ3 816 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CT55Q8WUE5 264 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 OSTF1Q92882 214 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 HGDQ93099 445 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GTPBP3Q969Y2 492 aaKnown RBP11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 IP6K3Q96PC2 410 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 LMF1Q96S06 567 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TMEM43Q9BTV4 400 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TEX12Q9BXU0 123 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DEFB126Q9BYW3 111 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FAM192AQ9GZU8 254 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 AKIRIN1Q9H9L7 192 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 IL20Q9NYY1 176 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FARSAQ9Y285 508 aaKnown RBP11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 MED31Q9Y3C7 131 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PCDHGB5Q9Y5G0 923 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 WDFY4Q6ZS81 3184 aa11.27□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 A0A087WUJ7 227 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 IGLV3-32A0A0A0MS00 114 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 IGHV3-20A0A0C4DH32 117 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GTPBP1O00178 669 aaKnown RBP11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SLC1A7O00341 560 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NDUFB5O43674 189 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CDC40O60508 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ANGPTL1O95841 491 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TP53P04637 393 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 LINGO3P0C6S8 592 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CEACAM1P13688 526 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GABRB1P18505 474 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FUT4P22083 530 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 MSX1P28360 303 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 POLR2IP36954 125 aaKnown RBP11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SMSP52788 366 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SNRPGP62308 76 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms