RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TMEM104Q8NE00 496 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 DYNC2LI1Q8TCX1 351 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 LRRC15Q8TF66 581 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MAFIPQ8WZ33 124 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ISL2Q96A47 359 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CCDC32Q9BV29 185 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 FUNDC2Q9BWH2 189 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 REG4Q9BYZ8 158 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CCDC90BQ9GZT6 254 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 LHPPQ9H008 270 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MIXL1Q9H2W2 232 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 WDCPQ9H6R7 721 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 APMAPQ9HDC9 416 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 PRDM7Q9NQW5 492 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 XPNPEP1Q9NQW7 623 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 TEX10Q9NXF1 929 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 DRG1Q9Y295 367 aaKnown RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 POLR3HQ9Y535 204 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 FLT4P35916 1363 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 LOC102723971A0A1B0GUV8 181 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 C1orf226A1L170 272 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MYMKA6NI61 221 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 PP2D1A8MPX8 630 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 E7ENX8 843 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 NPIPB8E9PQR5 432 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 M0QZ24 198 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 COPEO14579 308 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MID1O15344 667 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 HSPA12AO43301 675 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 TSPAN2O60636 221 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 LRP3O75074 770 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC43A1O75387 559 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MOCS2O96007 188 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CXCL10P02778 98 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 RAF1P04049 648 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC2A1P11166 492 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CYP7A1P22680 504 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SDHAP31040 664 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CFHR2P36980 270 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ASPAP45381 313 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ARL4DP49703 201 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 NUDT6P53370 316 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 RAB25P57735 213 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CSNK1G2P78368 415 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CSTF1Q05048 431 aaKnown RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 PMPCAQ10713 525 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CTTNQ14247 550 aaKnown RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CDNFQ49AH0 187 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC25A53Q5H9E4 307 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 PLAC9Q5JTB6 97 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 DCAF12L2Q5VW00 463 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 KDM4DQ6B0I6 523 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 XAF1Q6GPH4 301 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 C17orf107Q6ZR85 190 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 LRRC55Q6ZSA7 311 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SPATA6LQ8N4H0 392 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ARRDC1Q8N5I2 433 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 YIPF7Q8N8F6 280 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SYT14Q8NB59 555 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 PLA2G15Q8NCC3 412 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 BHLHE22Q8NFJ8 381 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 OR2L8Q8NGY9 312 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 OTUB1Q96FW1 271 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 HBEGFQ99075 208 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 RNF26Q9BY78 433 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 FBLN5Q9UBX5 448 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CA5BQ9Y2D0 317 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MRPS17Q9Y2R5 130 aaKnown RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MMACHCQ9Y4U1 282 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 TSSC4Q9Y5U2 329 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ANKRD31Q8N7Z5 1873 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SPEF2Q9C093 1822 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 COL2A1P02458 1487 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ATAD5Q96QE3 1844 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MBD3L4A6NDZ8 208 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MBD3L3A6NE82 208 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC28A1O00337 649 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CCSO14618 274 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 GSRP00390 522 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ALPLP05186 524 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 RAB40ALP0C0E4 278 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 H2AFZP0C0S5 128 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 CTSAP10619 480 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 GIFP27352 417 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC6A4P31645 630 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 PLA2G5P39877 138 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC6A11P48066 632 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 GMPSP49915 693 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SNRPD2P62316 118 aaKnown RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 HNF4GQ14541 408 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 FRMPD2BQ6IN97 320 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 RHBDF2Q6PJF5 856 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 H2AFVQ71UI9 128 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 PGAP1Q75T13 922 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 IRF2BP2Q7Z5L9 587 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ZC3HC1Q86WB0 502 aaKnown RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 DEFB107AQ8IZN7 70 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 APCDD1Q8J025 514 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SPAG16Q8N0X2 631 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 FBXL13Q8NEE6 735 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms