RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 PLA1AQ53H76 456 aa14.35□□□□□ -0.11
PPFIA3-206ENST00000602655 CCDC157Q569K6 752 aa14.35□□□□□ -0.11
PPFIA3-206ENST00000602655 THAP6Q8TBB0 222 aa14.35□□□□□ -0.11
PPFIA3-206ENST00000602655 CNOT9Q92600 299 aaKnown RBP14.35□□□□□ -0.11
PPFIA3-206ENST00000602655 C7orf34Q96L11 122 aa14.35□□□□□ -0.11
PPFIA3-206ENST00000602655 MEIKINA0A087WXM9 373 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 TRBV5-4A0A0C4DH59 114 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SGK494L7N484 410 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 NTSR1P30989 418 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 IRF4Q15306 451 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 LYPLAL1Q5VWZ2 237 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SLC27A4Q6P1M0 643 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 C11orf88Q6PI97 169 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 ZNF687Q8N1G0 1237 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 POPDC3Q9HBV1 291 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 MBD2Q9UBB5 411 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SLC27A6Q9Y2P4 619 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SCN3AQ9NY46 2000 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 NME6O75414 186 aaPredicted RBP14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 ZNF3P17036 446 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 ATP5A1P25705 553 aaKnown RBP14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 GZMMP51124 257 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SLC5A12Q1EHB4 618 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SIAH3Q8IW03 269 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 C11orf65Q8NCR3 313 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SCARB1Q8WTV0 552 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 NR4A3Q92570 626 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SENP5Q96HI0 755 aaPredicted RBP14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 LYSMD1Q96S90 227 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 PRR14Q9BWN1 585 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 CHMP1AQ9HD42 196 aaPredicted RBP14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 ASH2LQ9UBL3 628 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 GULP1Q9UBP9 304 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SCN2AQ99250 2005 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 STMND1H3BQB6 276 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 MANBAO00462 879 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 ALPPL2P10696 532 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 CXCL2P19875 107 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 XKP51811 444 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 TBPL1P62380 186 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 HTR4Q13639 388 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 PLK5Q496M5 336 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 GCNT6Q5T4J0 391 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 PIP5KL1Q5T9C9 394 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 TMEM92Q6UXU6 159 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 SERPINA11Q86U17 422 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 TMEM185AQ8NFB2 350 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 OR10K1Q8NGX5 313 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 ZNF480Q8WV37 535 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 ATF6BQ99941 703 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 NMNAT1Q9HAN9 279 aaPredicted RBP14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 TMEM45AQ9NWC5 275 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 FBXL21Q9UKT6 434 aa14.34□□□□□ -0.11
PPFIA3-206ENST00000602655 ZNF124Q15973 351 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 DUOXA1Q1HG43 343 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 C3orf38Q5JPI3 329 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 METAP1DQ6UB28 335 aaPredicted RBP14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 ZNF614Q8N883 585 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 TBC1D20Q96BZ9 403 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 FCRL4Q96PJ5 515 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 ACPTQ9BZG2 426 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 KLF2Q9Y5W3 355 aaPredicted RBP14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 GLOD5A6NK44 160 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 ABCD4O14678 606 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 ACAA1P09110 424 aaPredicted RBP14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 SLC35G4P0C7Q5 338 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 PEPDP12955 493 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 MAPK9P45984 424 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 MRPL19P49406 292 aaKnown RBP14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 ACSM2AQ08AH3 577 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 SLBPQ14493 270 aaKnown RBP eCLIP14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 ACSM2BQ68CK6 577 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 HMGN2P46Q86SG4 172 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 FAM129CQ86XR2 697 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 NAGSQ8N159 534 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 OR4K1Q8NGD4 311 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 EXOSC8Q96B26 276 aaKnown RBP14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 FBXO17Q96EF6 278 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 LRR1Q96L50 414 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 SLC17A9Q9BYT1 436 aa14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 POLR2J3Q9H1A7 115 aaKnown RBP14.33□□□□□ -0.12
PPFIA3-206ENST00000602655 TMEM200CA6NKL6 621 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 PPM1DO15297 605 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 SOD1P00441 154 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 SERPINA3P01011 423 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 ACTR1BP42025 376 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 PITPNBP48739 271 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 ACTR1AP61163 376 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 RPS13P62277 151 aaKnown RBP14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 CDK3Q00526 305 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 SPIN4Q56A73 249 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 PABPC1L2AQ5JQF8 200 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 AGBL4Q5VU57 503 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 OR5M10Q6IEU7 315 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 PTOV1Q86YD1 416 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 SLC44A3Q8N4M1 653 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 C1orf52Q8N6N3 182 aaKnown RBP14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 OR4E2Q8NGC2 313 aa14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 MRPS24Q96EL2 167 aaKnown RBP14.32□□□□□ -0.12
PPFIA3-206ENST00000602655 FOXQ1Q9C009 403 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms