RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 IL32P24001 234 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 LCN1P31025 176 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 RPL3P39023 403 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 EIF1P41567 113 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 IFFO1Q0D2I5 559 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 ATP6AP1LQ52LC2 224 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 DCST2Q5T1A1 773 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 BANPQ8N9N5 519 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 ZNF527Q8NB42 609 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 OR5P2Q8WZ92 322 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 AKAP1Q92667 903 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 ZNF775Q96BV0 537 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 ARSGQ96EG1 525 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 C3orf30Q96M34 536 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 STACQ99469 402 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 GPR52Q9Y2T5 361 aa15.68■□□□□ 0.1
SHKBP1-223ENST00000600552 A0A1W2PQD3 144 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 HSPA4LO95757 839 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 NID1P14543 1247 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 P2RX1P51575 399 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 ATP5J2P56134 94 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 RPS26P62854 115 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 ZNF239Q16600 458 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 LSM12Q3MHD2 195 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 PRSS57Q6UWY2 283 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 FCRLAQ7L513 359 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 OLIG3Q7RTU3 272 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 CLEC4FQ8N1N0 589 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 STEAP2Q8NFT2 490 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 OR56A1Q8NGH5 318 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 OR5D16Q8NGK9 328 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 RAB3IL1Q8TBN0 382 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 TCP10LQ8TDR4 215 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 TUBGCP3Q96CW5 907 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 PPP1R36Q96LQ0 422 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 PRPF18Q99633 342 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 HOXD1Q9GZZ0 328 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 CXorf56Q9H5V9 222 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 DUSP22Q9NRW4 184 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 ATAD3AQ9NVI7 634 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 LAMP3Q9UQV4 416 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 FREM1Q5H8C1 2179 aa15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 FN1P02751 2386 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-223ENST00000600552 A0A1W2PNR3 127 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 GJE1A6NN92 205 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 HS3ST1O14792 307 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 ADAP00813 363 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 ENPP1P22413 925 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 SLC7A1P30825 629 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 CASP9P55211 416 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 ZNF844Q08AG5 666 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 MLC1Q15049 377 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 GPR68Q15743 365 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 KLHL26Q53HC5 615 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 EXOSC6Q5RKV6 272 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 C6orf136Q5SQH8 315 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 RNF165Q6ZSG1 346 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 MTERF4Q7Z6M4 381 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 GPR119Q8TDV5 335 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 TRIM44Q96DX7 344 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 OR7D2Q96RA2 312 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 GSX2Q9BZM3 304 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 ZDHHC2Q9UIJ5 367 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 TLN2Q9Y4G6 2542 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 RAI1Q7Z5J4 1906 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 ABCA2Q9BZC7 2435 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 CSPG4Q6UVK1 2322 aa15.66■□□□□ 0.1
SHKBP1-223ENST00000600552 PRKD3O94806 890 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 KRT16P08779 473 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 ATP12AP54707 1039 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 PPP2R2BQ00005 443 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 RNPS1Q15287 305 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 EIF1ADQ8N9N8 165 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 RNF128Q8TEB7 428 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 NEUROG1Q92886 237 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 CPNE4Q96A23 557 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 DUSP26Q9BV47 211 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 QRSL1Q9H0R6 528 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 GPATCH2Q9NW75 528 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 KLHL13Q9P2N7 655 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 ICAM5Q9UMF0 924 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 DTNAQ9Y4J8 743 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 GPC6Q9Y625 555 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 JMJD1CQ15652 2540 aa15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 NSD1Q96L73 2696 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-223ENST00000600552 WDR91A4D1P6 747 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 INAFM1C9JVW0 142 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 LYPLA1O75608 230 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 CD3EP07766 207 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 YES1P07947 543 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 G6PDP11413 515 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 CREB1P16220 341 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 PRKCAP17252 672 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 PSMB1P20618 241 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 ELK4P28324 431 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 ARRB2P32121 409 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 QPRTQ15274 297 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms