RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 FOXF1Q12946 379 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 LCP2Q13094 533 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 PPA1Q15181 289 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 NRF1Q16656 503 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 TMEM176BQ3YBM2 270 aaPredicted RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 SPDYAQ5MJ70 313 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 TMEM201Q5SNT2 666 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 TIMM23BQ5SRD1 257 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 TEX35Q5T0J7 233 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.39□□□□□ -1.55
VRK3-220ENST00000600259 PDSS1Q5T2R2 415 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 CCNJQ5T5M9 372 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 AGAP6Q5VW22 663 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 B3GLCTQ6Y288 498 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 FCRLAQ7L513 359 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 MISPQ8IVT2 679 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 SLC43A2Q8N370 569 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 ZNF433Q8N7K0 673 aaPredicted RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 BANPQ8N9N5 519 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 NUP43Q8NFH3 380 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 CEP70Q8NHQ1 597 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 B4GALNT2Q8NHY0 566 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 FBXO27Q8NI29 283 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 GPR119Q8TDV5 335 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 C10orf105Q8TEF2 133 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 CIDECQ96AQ7 238 aaPredicted RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 ZNF775Q96BV0 537 aaPredicted RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 SH3YL1Q96HL8 342 aaPredicted RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 METTL2AQ96IZ6 378 aaKnown RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 HS6ST2Q96MM7 605 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 CACNG6Q9BXT2 260 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 BEX2Q9BXY8 128 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 POTEKPQ9BYX7 375 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 HHATLQ9HCP6 504 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 EQTNQ9NQ60 294 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 MIEF1Q9NQG6 463 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 SIRT3Q9NTG7 399 aaPredicted RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 CBLN4Q9NTU7 201 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 SENP1Q9P0U3 644 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 EMCNQ9ULC0 261 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 POLR3HQ9Y535 204 aaPredicted RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 SLC25A15Q9Y619 301 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 KCNE3Q9Y6H6 103 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 MALRD1Q5VYJ5 2156 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 MEGF8Q7Z7M0 2845 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 A0A1W2PNR3 127 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 OR5H1A6NKK0 313 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ZNF724A8MTY0 619 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 POC1B-GALNT4F8VUJ3 575 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 G3V2L1 256 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 H7C417 338 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 PDLIM1O00151 329 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ABCD4O14678 606 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 SMAD9O15198 467 aaKnown RBP5.38□□□□□ -1.55
VRK3-220ENST00000600259 LMX1BO60663 402 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 CYTIPO60759 359 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 RSL1D1O76021 490 aaKnown RBP5.38□□□□□ -1.55
VRK3-220ENST00000600259 H6PDO95479 791 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 FESP07332 822 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 SLC25A16P16260 332 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 PRKCAP17252 672 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 TAC1P20366 129 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ME2P23368 584 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 IGFBP5P24593 272 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ZNF41P51814 821 aaPredicted RBP5.38□□□□□ -1.55
VRK3-220ENST00000600259 PRKAG1P54619 331 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 CDH11P55287 796 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 FOXG1P55316 489 aaPredicted RBP5.38□□□□□ -1.55
VRK3-220ENST00000600259 HSPB3Q12988 150 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 PDE7AQ13946 482 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 MST1LQ2TV78 715 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 VPS26BQ4G0F5 336 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 CYB5R2Q6BCY4 276 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ANKRD26P1Q6NSI1 321 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ZCCHC12Q6PEW1 402 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 LRIG3Q6UXM1 1119 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 IKBIPQ70UQ0 350 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 MTERF4Q7Z6M4 381 aaKnown RBP5.38□□□□□ -1.55
VRK3-220ENST00000600259 P2RY8Q86VZ1 359 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 MMGT1Q8N4V1 131 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ZNF525Q8N782 197 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 CEP112Q8N8E3 955 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 WDR31Q8NA23 367 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 CDC26Q8NHZ8 85 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 FBXO30Q8TB52 745 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 MZB1Q8WU39 189 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 HTRA1Q92743 480 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 PROX1Q92786 737 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 OTUB1Q96FW1 271 aaPredicted RBP5.38□□□□□ -1.55
VRK3-220ENST00000600259 RADILQ96JH8 1075 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 MRGPRX4Q96LA9 322 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 MUS81Q96NY9 551 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ZNF300Q96RE9 604 aaPredicted RBP5.38□□□□□ -1.55
VRK3-220ENST00000600259 DHRS9Q9BPW9 319 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 BTBD2Q9BX70 525 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 PIGUQ9H490 435 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 TUBB1Q9H4B7 451 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 REEP4Q9H6H4 257 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ANKZF1Q9H8Y5 726 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 L2HGDHQ9H9P8 463 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms