RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 LRIF1Q5T3J3 769 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 METTL21CQ5VZV1 264 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 PLXDC2Q6UX71 529 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 LRRC74BQ6ZQY2 392 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 EIF3MQ7L2H7 374 aaKnown RBP15.08■□□□□ 0
SSBP4-204ENST00000597724 ACBD4Q8NC06 268 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 OR5W2Q8NH69 310 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 POC1BQ8TC44 478 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 RNF145Q96MT1 663 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 TM9SF2Q99805 663 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 LAT2Q9GZY6 243 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 ENKD1Q9H0I2 346 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 ZNF385DQ9H6B1 395 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 CCDC134Q9H6E4 229 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 FGFR1OP2Q9NVK5 253 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 STOML1Q9UBI4 398 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 HCFC1P51610 2035 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 TACC2O95359 2948 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 TEX15Q9BXT5 2789 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 NOTCH2Q04721 2471 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 HEATR5AQ86XA9 2040 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 DVL2O14641 736 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 SEC14L5O43304 696 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 DNAJA2O60884 412 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 CSTAP01040 98 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 CHRM4P08173 479 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 NR2F1P10589 423 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 ADH6P28332 368 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 EIF1P41567 113 aaKnown RBP15.07■□□□□ 0
SSBP4-204ENST00000597724 CRATP43155 626 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 MAPK11Q15759 364 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 TOMM34Q15785 309 aaPredicted RBP15.07■□□□□ 0
SSBP4-204ENST00000597724 CHMP1BQ7LBR1 199 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 GGNQ86UU5 652 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 FAM71CQ8NEG0 241 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 TOR1AIP2Q8NFQ8 470 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 PMM1Q92871 262 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 MARVELD3Q96A59 401 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 ZNF524Q96C55 264 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 ARSGQ96EG1 525 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 ZFP3Q96NJ6 502 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 RUBCNLQ9H714 662 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 MTHFD2LQ9H903 347 aaPredicted RBP15.07■□□□□ 0
SSBP4-204ENST00000597724 NPDC1Q9NQX5 325 aaPredicted RBP15.07■□□□□ 0
SSBP4-204ENST00000597724 SLC25A37Q9NYZ2 338 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 SLAMF8Q9P0V8 285 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 APCP25054 2843 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 MED12LQ86YW9 2145 aa15.07■□□□□ 0
SSBP4-204ENST00000597724 INTS1Q8N201 2190 aaKnown RBP15.07■□□□□ 0
SSBP4-204ENST00000597724 LRBAP50851 2863 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 A0A1W2PP18 115 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 CLIC1O00299 241 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 RCBTB2O95199 551 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 NTN1O95631 604 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 TGM6O95932 706 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 VIMP08670 466 aaKnown RBP15.06■□□□□ 0
SSBP4-204ENST00000597724 TFPTP0C1Z6 253 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 TROVE2P10155 538 aaKnown RBP eCLIP15.06■□□□□ 0
SSBP4-204ENST00000597724 COX6B1P14854 86 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 PRKCAP17252 672 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 IGFBP2P18065 325 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 BMP5P22003 454 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 CTSSP25774 331 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 PGM1P36871 562 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 DSTNP60981 165 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 RPS3AP61247 264 aaKnown RBP15.06■□□□□ 0
SSBP4-204ENST00000597724 RAC1P63000 192 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 RGNQ15493 299 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 CGB2Q6NT52 195 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 HMGN2P46Q86SG4 172 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 GRAMD2AQ8IUY3 354 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 MSRB3Q8IXL7 192 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 TMCO5AQ8N6Q1 288 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 METTL25Q8N6Q8 603 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 RELL2Q8NC24 303 aaPredicted RBP15.06■□□□□ 0
SSBP4-204ENST00000597724 FBXO27Q8NI29 283 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 SMPDL3BQ92485 455 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 SPOCK3Q9BQ16 436 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 TREX2Q9BQ50 279 aaPredicted RBP15.06■□□□□ 0
SSBP4-204ENST00000597724 THUMPD3Q9BV44 507 aaKnown RBP15.06■□□□□ 0
SSBP4-204ENST00000597724 TMEM120AQ9BXJ8 343 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 QRSL1Q9H0R6 528 aaKnown RBP15.06■□□□□ 0
SSBP4-204ENST00000597724 THUMPD1Q9NXG2 353 aaKnown RBP15.06■□□□□ 0
SSBP4-204ENST00000597724 P2RX2Q9UBL9 471 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 SLC35A3Q9Y2D2 325 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 GPC6Q9Y625 555 aaPredicted RBP15.06■□□□□ 0
SSBP4-204ENST00000597724 CACNA1DQ01668 2161 aa15.06■□□□□ 0
SSBP4-204ENST00000597724 AGAP5A6NIR3 686 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 SLC22A20A6NK97 555 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 ETV2O00321 342 aaPredicted RBP15.05■□□□□ -0
SSBP4-204ENST00000597724 EFNA2O43921 213 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 BCAS1O75363 584 aaPredicted RBP15.05■□□□□ -0
SSBP4-204ENST00000597724 CYP7B1O75881 506 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 IL18BPO95998 194 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 UBTFL6P0CB48 400 aaPredicted RBP15.05■□□□□ -0
SSBP4-204ENST00000597724 TMIGD3P0DMS9 266 aaPredicted RBP15.05■□□□□ -0
SSBP4-204ENST00000597724 IL11P20809 199 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 OPRM1P35372 400 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 MDH1P40925 334 aaKnown RBP15.05■□□□□ -0
SSBP4-204ENST00000597724 CCR4P51679 360 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms