RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 GRAMD2AQ8IUY3 354 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 ANKFN1Q8N957 763 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 TOR1AIP2Q8NFQ8 470 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 ZNF524Q96C55 264 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 RNF145Q96MT1 663 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 SIKE1Q9BRV8 207 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 SLC38A1Q9H2H9 487 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 TPT1P8Q9HAU6 139 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 CCDC167Q9P0B6 97 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 STOML1Q9UBI4 398 aa18.99■□□□□ 0.63
PNKP-209ENST00000596726 APCP25054 2843 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 UQCRHLA0A096LP55 91 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 SEC14L5O43304 696 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 CHRM4P08173 479 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 TMIGD3P0DMS9 266 aaPredicted RBP18.98■□□□□ 0.63
PNKP-209ENST00000596726 ADH6P28332 368 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 OPRM1P35372 400 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 EIF1P41567 113 aaKnown RBP18.98■□□□□ 0.63
PNKP-209ENST00000596726 RAC1P63000 192 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 FOXF2Q12947 444 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 SKP2Q13309 424 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 SQLEQ14534 574 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 MAPK11Q15759 364 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 TOMM34Q15785 309 aaPredicted RBP18.98■□□□□ 0.63
PNKP-209ENST00000596726 C6orf10Q5SRN2 563 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 MEX3BQ6ZN04 569 aaKnown RBP18.98■□□□□ 0.63
PNKP-209ENST00000596726 LRRC74BQ6ZQY2 392 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 CHMP1BQ7LBR1 199 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 ZNF295-AS1Q8N0V1 137 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 ARFGAP2Q8N6H7 521 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 FAM71CQ8NEG0 241 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 OR5W2Q8NH69 310 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 SMPDL3BQ92485 455 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 SPDL1Q96EA4 605 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 ADGRG7Q96K78 797 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 TRIM8Q9BZR9 551 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 ZNF385DQ9H6B1 395 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 NPHS2Q9NP85 383 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 DCTN4Q9UJW0 460 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 PCDHB14Q9Y5E9 798 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 FBN2P35556 2912 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 NOTCH2Q04721 2471 aa18.98■□□□□ 0.63
PNKP-209ENST00000596726 ETV2O00321 342 aaPredicted RBP18.97■□□□□ 0.63
PNKP-209ENST00000596726 EFNA2O43921 213 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 NTN1O95631 604 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 NUDT14O95848 222 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 CSTAP01040 98 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 PGM1P36871 562 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 DLX5P56178 289 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 FOXF1Q12946 379 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 FBXL19-AS1Q494R0 122 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 AGKQ53H12 422 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 SLC25A53Q5H9E4 307 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 EIF3MQ7L2H7 374 aaKnown RBP18.97■□□□□ 0.63
PNKP-209ENST00000596726 MCEMP1Q8IX19 187 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 DMRTC2Q8IXT2 367 aaPredicted RBP18.97■□□□□ 0.63
PNKP-209ENST00000596726 AURKBQ96GD4 344 aaPredicted RBP18.97■□□□□ 0.63
PNKP-209ENST00000596726 JKAMPQ9P055 326 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 SLC35A3Q9Y2D2 325 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 ZNF175Q9Y473 711 aa18.97■□□□□ 0.63
PNKP-209ENST00000596726 GPC6Q9Y625 555 aaPredicted RBP18.97■□□□□ 0.63
PNKP-209ENST00000596726 A0A096LPI6 279 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 SLC22A20A6NK97 555 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 SYT5O00445 386 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 NR5A2O00482 541 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 ADAMDEC1O15204 470 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 ETFAP13804 333 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 CD1EP15812 388 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 PRKCAP17252 672 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 CAPN3P20807 821 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 IL11P20809 199 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 RPS4Y1P22090 263 aaKnown RBP18.96■□□□□ 0.63
PNKP-209ENST00000596726 ELK4P28324 431 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 ASCL1P50553 236 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 RPS3AP61247 264 aaKnown RBP18.96■□□□□ 0.63
PNKP-209ENST00000596726 HPCAP84074 193 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 CBFBQ13951 182 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 CTU2Q2VPK5 515 aaKnown RBP18.96■□□□□ 0.63
PNKP-209ENST00000596726 LRIF1Q5T3J3 769 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 FBXO27Q8NI29 283 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 FIG4Q92562 907 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 PMM1Q92871 262 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 INTS12Q96CB8 462 aaKnown RBP18.96■□□□□ 0.63
PNKP-209ENST00000596726 ZNF845Q96IR2 970 aaPredicted RBP18.96■□□□□ 0.63
PNKP-209ENST00000596726 SFXN3Q9BWM7 321 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 PINK1Q9BXM7 581 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 QRSL1Q9H0R6 528 aaKnown RBP18.96■□□□□ 0.63
PNKP-209ENST00000596726 MTHFD2LQ9H903 347 aaPredicted RBP18.96■□□□□ 0.63
PNKP-209ENST00000596726 MED4Q9NPJ6 270 aa18.96■□□□□ 0.63
PNKP-209ENST00000596726 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.96■□□□□ 0.63
PNKP-209ENST00000596726 TEX15Q9BXT5 2789 aa18.95■□□□□ 0.62
PNKP-209ENST00000596726 AGAP5A6NIR3 686 aa18.95■□□□□ 0.62
PNKP-209ENST00000596726 CLIC1O00299 241 aa18.95■□□□□ 0.62
PNKP-209ENST00000596726 ATP8B1O43520 1251 aa18.95■□□□□ 0.62
PNKP-209ENST00000596726 BCAS1O75363 584 aaPredicted RBP18.95■□□□□ 0.62
PNKP-209ENST00000596726 NR2F1P10589 423 aa18.95■□□□□ 0.62
PNKP-209ENST00000596726 AGFG1P52594 562 aaKnown RBP18.95■□□□□ 0.62
PNKP-209ENST00000596726 EEF1A1P68104 462 aaKnown RBP18.95■□□□□ 0.62
PNKP-209ENST00000596726 KCNJ10P78508 379 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms