RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CASP3P42574 277 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 CLK3P49761 638 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 RRADP55042 308 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 TAS2R41P59536 307 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 CDC20Q12834 499 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 SNTA1Q13424 505 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 DAG1Q14118 895 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF468Q5VIY5 522 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 FAHD1Q6P587 224 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF613Q6PF04 617 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 CBLN3Q6UW01 205 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 IZUMO2Q6UXV1 221 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 GDF7Q7Z4P5 450 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 TMEM156Q8N614 296 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 CLEC1AQ8NC01 280 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF248Q8NDW4 579 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 OR5M3Q8NGP4 307 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 ADAMTS16Q8TE57 1224 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 PAQR8Q8TEZ7 354 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 GIPC3Q8TF64 312 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 FAM122AQ96E09 287 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 ARSGQ96EG1 525 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 SLC41A3Q96GZ6 507 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 FRMD6Q96NE9 622 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 KLHDC3Q9BQ90 382 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 OSBPL10Q9BXB5 764 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 DPH1Q9BZG8 443 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 CPNE5Q9HCH3 593 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 PRDM4Q9UKN5 801 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 ICAM5Q9UMF0 924 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 CARD8Q9Y2G2 431 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 A0A0B4J2E0 115 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 A0A1B0GX12 115 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ARGFXA6NJG6 315 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 B4DXG7 233 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 DLGAP1O14490 977 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 CDK2AP1O14519 115 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 EI24O14681 340 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ALPLP05186 524 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 PRKACGP22612 351 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ITGA3P26006 1051 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 SLC6A8P48029 635 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 HLCSP50747 726 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ALDH3A2P51648 485 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 AQP4P55087 323 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 RPP38P78345 283 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ST3GAL3Q11203 375 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 LAPTM4AQ15012 233 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 TRAM2Q15035 370 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 SEC23BQ15437 767 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 MICAQ29983 383 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ANKRD34AQ69YU3 496 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 BICRALQ6AI39 1079 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF770Q6IQ21 691 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 IL20RBQ6UXL0 311 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF227Q86WZ6 799 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 BEST3Q8N1M1 668 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 GALNT16Q8N428 558 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 GALNT4Q8N4A0 578 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 OR52J3Q8NH60 311 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 SLC7A13Q8TCU3 470 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 SGCZQ96LD1 299 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF597Q96LX8 424 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 ALPK1Q96QP1 1244 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 PRSS27Q9BQR3 290 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 TACO1Q9BSH4 297 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 TMEM27Q9HBJ8 222 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 PROK2Q9HC23 129 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 CTPS2Q9NRF8 586 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 HPF1Q9NWY4 346 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 PDP1Q9P0J1 537 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 TMEFF2Q9UIK5 374 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 POLHQ9Y253 713 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 HRH3Q9Y5N1 445 aa13.46□□□□□ -0.25
SHKBP1-211ENST00000595945 CHD8Q9HCK8 2581 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 A0A1B0GWA3 101 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 SH3PXD2BA1X283 911 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 C7orf72A4D263 438 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 ANKRD33BA6NCL7 494 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 CCNB2O95067 398 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 PRKAR1AP10644 381 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 IFNA8P32881 189 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 ID4P47928 161 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 P2RX1P51575 399 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 ARHGDIAP52565 204 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 SUMO3P55854 103 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 C17orf67Q0P5P2 114 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 DCST1Q5T197 706 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 OTUD3Q5T2D3 398 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 KDM4DQ6B0I6 523 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 SLC30A6Q6NXT4 461 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 PODNL1Q6PEZ8 512 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 LINC00114Q6XXX2 140 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 RTL4Q6ZR62 310 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 NKAIN4Q8IVV8 208 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 OR10G2Q8NGC3 310 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 OR5W2Q8NH69 310 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 DUSP19Q8WTR2 217 aa13.45□□□□□ -0.26
SHKBP1-211ENST00000595945 ZNF524Q96C55 264 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms