RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 NUP214P35658 2090 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 ANKHD1Q8IWZ3 2542 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 UQCRHLA0A096LP55 91 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 NPIPA5A0A0B4J1W7 369 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 CCDC154A6NI56 674 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 NPIPA7E9PJI5 369 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 DIAPH2O60879 1101 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 TNFSF13O75888 250 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 KRT75O95678 551 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 PABPC4LP0CB38 370 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 NPIPA8P0DM63 369 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 EIF1AXP47813 144 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 AGFG1P52594 562 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 STX1BP61266 288 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 IRX1P78414 480 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 SLC9B1Q4ZJI4 515 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 PDZK1Q5T2W1 519 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 TNFAIP8L2Q6P589 184 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 ZZZ3Q8IYH5 903 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 CLEC4FQ8N1N0 589 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 MIER2Q8N344 545 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 CNEP1R1Q8N9A8 125 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 OR5W2Q8NH69 310 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 OR10D3Q8NH80 312 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 OR2V1Q8NHB1 315 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 FNDC9Q8TBE3 224 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 XAGE5Q8WWM1 108 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 FIG4Q92562 907 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 PMM1Q92871 262 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 ROPN1LQ96C74 230 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 TEX37Q96LM6 180 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 KLHL15Q96M94 604 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 CRIM1Q9NZV1 1036 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 EMC9Q9Y3B6 208 aa15.95■□□□□ 0.14
SHKBP1-204ENST00000594862 A8MXE2 369 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 SHISA8B8ZZ34 492 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 RFXANKO14593 260 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 POLR3GO15318 223 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 PLGP00747 810 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 CSTAP01040 98 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 OR12D1P0DN82 309 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 CD8BP10966 210 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 CCR4P51679 360 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 FOXF1Q12946 379 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 SELENBP1Q13228 472 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 DAZAP2Q15038 168 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 GTF2IRD2BQ6EKJ0 949 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 CBLN3Q6UW01 205 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 LUZP2Q86TE4 346 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 GTF2IRD2Q86UP8 949 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 LILRA2Q8N149 483 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 ZNF619Q8N2I2 560 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 TMEM234Q8WY98 164 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 ST8SIA1Q92185 356 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 GMPPAQ96IJ6 420 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 ZNF845Q96IR2 970 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 TRNT1Q96Q11 434 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 SLC39A3Q9BRY0 314 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 LAT2Q9GZY6 243 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 SAP130Q9H0E3 1048 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 FANCFQ9NPI8 374 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 GALNT8Q9NY28 637 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 MKLN1Q9UL63 735 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 MED12LQ86YW9 2145 aa15.94■□□□□ 0.14
SHKBP1-204ENST00000594862 H0YC42 278 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 ETV2O00321 342 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 ZNF195O14628 629 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 FCMRO60667 390 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 UGT2B17O75795 530 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 SMNDC1O75940 238 aaKnown RBP eCLIP15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 ZCCHC18P0CG32 403 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 EPXP11678 715 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 H2AFXP16104 143 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 PRKCAP17252 672 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 PGCP20142 388 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 IL12AP29459 219 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 MRPL19P49406 292 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 TPD52P55327 224 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 SKP2Q13309 424 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 GNA13Q14344 377 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 GPAT3Q53EU6 434 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 TTMPQ5BVD1 217 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 SLC25A53Q5H9E4 307 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 HBMQ6B0K9 141 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 TYW3Q6IPR3 259 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 EPGNQ6UW88 154 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 ZNF621Q6ZSS3 439 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 FAM214BQ7L5A3 538 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 MAVSQ7Z434 540 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 RNF130Q86XS8 419 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 CMIPQ8IY22 773 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 POC1BQ8TC44 478 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 GPR119Q8TDV5 335 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 RAB8BQ92930 207 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 CPNE4Q96A23 557 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 REXO5Q96IC2 774 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 ITCHQ96J02 903 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 ADGRG7Q96K78 797 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 TCF7L2Q9NQB0 619 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms