RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TAF8Q7Z7C8 310 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 TBC1D19Q8N5T2 526 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 TEX47Q8TBZ9 253 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 SLC37A2Q8TED4 501 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 OR5P2Q8WZ92 322 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 ZNF436Q9C0F3 470 aaPredicted RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 PRDM7Q9NQW5 492 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 NDUFB11Q9NX14 153 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 MS4A12Q9NXJ0 267 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 ACTR10Q9NZ32 417 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 FBXL21Q9UKT6 434 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 TMEM5Q9Y2B1 443 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 MRPS17Q9Y2R5 130 aaKnown RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 A0A1B0GVI7 797 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 GSAPA4D1B5 854 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 TNFRSF11BO00300 401 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 ADAMDEC1O15204 470 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 GATCO43716 136 aaKnown RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 SELENOFO60613 162 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 PRAMEF10O60809 474 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 SSTR2P30874 369 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 STARD6P59095 220 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 RPS26P62854 115 aaKnown RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 PPP3R1P63098 170 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 CSTF1Q05048 431 aaKnown RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 HSPB3Q12988 150 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 HNRNPA0Q13151 305 aaKnown RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 BHLHB9Q6PI77 547 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 CEACAM20Q6UY09 585 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 SLC44A2Q8IWA5 706 aaPredicted RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 OR2L5Q8NG80 312 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 SLC22A18Q96BI1 424 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 KLHDC7BQ96G42 594 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 RBCK1Q9BYM8 510 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 BRD7Q9NPI1 651 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 ZNF222Q9UK12 451 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 SH3D21A4FU49 640 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 HIST1H1TP22492 207 aaPredicted RBP14.31□□□□□ -0.12
PNKP-204ENST00000594661 SLC6A1P30531 599 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 RAB13P51153 203 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 PCBP4P57723 403 aaKnown RBP14.31□□□□□ -0.12
PNKP-204ENST00000594661 RAB8AP61006 207 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 SSTP61278 116 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 SNRPNP63162 240 aaKnown RBP14.31□□□□□ -0.12
PNKP-204ENST00000594661 SPIBQ01892 262 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 SNAPC1Q16533 368 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 CRB2Q5IJ48 1285 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 PLAG1Q6DJT9 500 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 TNFAIP8L2Q6P589 184 aaPredicted RBP14.31□□□□□ -0.12
PNKP-204ENST00000594661 PARGQ86W56 976 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 ACOT4Q8N9L9 421 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 WDR36Q8NI36 951 aaKnown RBP14.31□□□□□ -0.12
PNKP-204ENST00000594661 POT1Q9NUX5 634 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 COPZ2Q9P299 210 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 SSR3Q9UNL2 185 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 ZNF451Q9Y4E5 1061 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 ASB4Q9Y574 426 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 PCDHGA2Q9Y5H1 932 aa14.31□□□□□ -0.12
PNKP-204ENST00000594661 M0R233 179 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 GTPBP1O00178 669 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 WNT1P04628 370 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 PIPP12273 146 aaPredicted RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 CTSEP14091 401 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 ATP5A1P25705 553 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 CERS1P27544 350 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 PRKAR1BP31321 381 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 SDC2P34741 201 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 FRKP42685 505 aaPredicted RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 GSTM5P46439 218 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 PCBP3P57721 371 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 TRA2BP62995 288 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 SPDYE7PQ495Y7 208 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 FBXO42Q6P3S6 717 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 C17orf107Q6ZR85 190 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 RASSF6Q6ZTQ3 369 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 ZNF761Q86XN6 746 aaPredicted RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 STPG2Q8N412 459 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 OR52J3Q8NH60 311 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 GEMIN6Q8WXD5 167 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 AP3S1Q92572 193 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 NEURL3Q96EH8 262 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 GUCD1Q96NT3 240 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 MED18Q9BUE0 208 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 LRRC61Q9BV99 259 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 NEUROD4Q9HD90 331 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 WNT16Q9UBV4 365 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 CTSFQ9UBX1 484 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 NDRG3Q9UGV2 375 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 GON4LQ3T8J9 2241 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 TDRD6O60522 2096 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 PRAMEF25A6NGN4 478 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 GLOD5A6NK44 160 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 TPST2O60704 377 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 CTSVO60911 334 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 ECDO95905 644 aaPredicted RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 SOX3P41225 446 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 EPHA4P54764 986 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 CDH12P55289 794 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 RPS15AP62244 130 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 SLC9A5Q14940 896 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms