RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 NUDT6P53370 316 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 FOXG1P55316 489 aaPredicted RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 RPL38P63173 70 aaKnown RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 CKAP4Q07065 602 aaKnown RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 ITGADQ13349 1161 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 P2RY6Q15077 328 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 RFTN2Q52LD8 501 aaPredicted RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 EXOSC6Q5RKV6 272 aaKnown RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 PDSS1Q5T2R2 415 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 CDC73Q6P1J9 531 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 LRIG3Q6UXM1 1119 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 ZYG11AQ6WRX3 759 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 TRIM46Q7Z4K8 759 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 PIAS4Q8N2W9 510 aaPredicted RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 ZNF525Q8N782 197 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 ACTRT2Q8TDY3 377 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 MZB1Q8WU39 189 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 PPCDCQ96CD2 204 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 FAM120BQ96EK7 910 aaKnown RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 REXO5Q96IC2 774 aaKnown RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 PSD2Q9BQI7 771 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 C1QTNF6Q9BXI9 259 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 CACNG6Q9BXT2 260 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 QRSL1Q9H0R6 528 aaKnown RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 TUBB1Q9H4B7 451 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 ALG2Q9H553 416 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 LRTM1Q9HBL6 345 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 ZCCHC3Q9NUD5 404 aaKnown RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 STOML1Q9UBI4 398 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 ATRQ13535 2644 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 CENPVL1A0A0U1RR11 272 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 TMEM233B4DJY2 109 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 E7EQL1 145 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 SMAD9O15198 467 aaKnown RBP9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 TMCC2O75069 709 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 RAD51DO75771 328 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 PRKD3O94806 890 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 HMGN2P05204 90 aaKnown RBP9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 YES1P07947 543 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 NGFRP08138 427 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 GSTA1P08263 222 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 FAM153BP0C7A2 387 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 LINC00032P0C843 101 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 MYL2P10916 166 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 PRKCAP17252 672 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 ZNF83P51522 516 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 CCR4P51679 360 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 POU6F2P78424 691 aaPredicted RBP9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 PPA1Q15181 289 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 ETFDHQ16134 617 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 TMEM249Q2WGJ8 235 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 FAM153CQ494X1 144 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 GTF2IRD2BQ6EKJ0 949 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 Q6ZSR9 355 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 FRMD7Q6ZUT3 714 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 IKBIPQ70UQ0 350 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 GTF2IRD2Q86UP8 949 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 DTX2Q86UW9 622 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 GSPT2Q8IYD1 628 aaKnown RBP9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 OR7A2PQ8NGA2 310 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 OR52N5Q8NH56 324 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 ZFP90Q8TF47 636 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 TMEM158Q8WZ71 300 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 HSD17B8Q92506 261 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 ZNF75CPQ92670 426 aaPredicted RBP9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 CPNE4Q96A23 557 aaPredicted RBP9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 HDHD5Q9BXW7 423 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 REEP4Q9H6H4 257 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 FANCFQ9NPI8 374 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 RRAGDQ9NQL2 400 aaPredicted RBP9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 UBQLN4Q9NRR5 601 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 ICAM5Q9UMF0 924 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 STK38LQ9Y2H1 464 aa9.9□□□□□ -0.82
PRKCSH-220ENST00000593104 A0A1W2PQD3 144 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 CCDC151A5D8V7 595 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 RIPK2O43353 540 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 CYP7B1O75881 506 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 IFNA2P01563 188 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 PROCP04070 461 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 FRKP42685 505 aaPredicted RBP9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 OR3A2P47893 321 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 P2RX1P51575 399 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 RPS26P62854 115 aaKnown RBP9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 CHRNEQ04844 493 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 RASGEF1BQ0VAM2 473 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 PDE7AQ13946 482 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 QPRTQ15274 297 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 RNPS1Q15287 305 aaKnown RBP9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 GALNTL6Q49A17 601 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 VPS26BQ4G0F5 336 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 LIPMQ5VYY2 423 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 HMGN2P46Q86SG4 172 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 CLEC4FQ8N1N0 589 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 TMCO5AQ8N6Q1 288 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 OR5D16Q8NGK9 328 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 OR6Y1Q8NGX8 325 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 OR5AK3PQ8NH89 298 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 CEP70Q8NHQ1 597 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 ZFP28Q8NHY6 868 aa9.89□□□□□ -0.83
PRKCSH-220ENST00000593104 FAM76AQ8TAV0 307 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms