RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ACAA2P42765 397 aaKnown RBP18.18■□□□□ 0.5
CLIP3-206ENST00000593074 DMWDQ09019 674 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 FUT7Q11130 342 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 ZNF267Q14586 743 aaPredicted RBP18.18■□□□□ 0.5
CLIP3-206ENST00000593074 LAPTM4BQ86VI4 370 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 LSRQ86X29 649 aaPredicted RBP18.18■□□□□ 0.5
CLIP3-206ENST00000593074 LNX2Q8N448 690 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 ZNF614Q8N883 585 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 ARHGAP9Q9BRR9 750 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 FN3KQ9H479 309 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 MEPEQ9NQ76 525 aaPredicted RBP18.18■□□□□ 0.5
CLIP3-206ENST00000593074 A0A1B0GWA3 101 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 H0YIG0 161 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 RCBTB2O95199 551 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 TSPAN19P0C672 248 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 CT45A8P0DMV1 189 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 CT45A9P0DMV2 189 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 BCAP31P51572 246 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 DSG2Q14126 1118 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 ZSWIM7Q19AV6 140 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 CT45A2Q5DJT8 189 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 PLEKHG7Q6ZR37 379 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 GID4Q8IVV7 300 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 CDK20Q8IZL9 346 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 LSMEM1Q8N8F7 131 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 RCBTB1Q8NDN9 531 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 RNF217Q8TC41 542 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 ARSGQ96EG1 525 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 ZNF649Q9BS31 505 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 BARHL1Q9BZE3 327 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 SPRTNQ9H040 489 aaPredicted RBP18.18■□□□□ 0.5
CLIP3-206ENST00000593074 NUAK2Q9H093 628 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 Q9N2J8 555 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 QPCTLQ9NXS2 382 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 SIGLEC7Q9Y286 467 aa18.18■□□□□ 0.5
CLIP3-206ENST00000593074 A0A1B0GVT2 93 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 GALNSP34059 522 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 RBM34P42696 430 aaKnown RBP18.17■□□□□ 0.5
CLIP3-206ENST00000593074 RANBP1P43487 201 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 OR1D5P58170 312 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 FGFBP1Q14512 234 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 ZNF181Q2M3W8 571 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 PLK5Q496M5 336 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 CXXC5Q7LFL8 322 aaKnown RBP18.17■□□□□ 0.5
CLIP3-206ENST00000593074 BMP8AQ7Z5Y6 402 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 CPOQ8IVL8 374 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 PARP16Q8N5Y8 322 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 OR4F15Q8NGB8 312 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 OR51Q1Q8NH59 317 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 C16orf52Q8NHV5 167 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 GRHL3Q8TE85 626 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 SNRNP27Q8WVK2 155 aaKnown RBP18.17■□□□□ 0.5
CLIP3-206ENST00000593074 GATAD2BQ8WXI9 593 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 G6PC3Q9BUM1 346 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 TRIM2Q9C040 744 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 ENKD1Q9H0I2 346 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.17■□□□□ 0.5
CLIP3-206ENST00000593074 TXNL4BQ9NX01 149 aaKnown RBP18.17■□□□□ 0.5
CLIP3-206ENST00000593074 CRNNQ9UBG3 495 aaPredicted RBP18.17■□□□□ 0.5
CLIP3-206ENST00000593074 ERVK-19Q9WJR5 959 aa18.17■□□□□ 0.5
CLIP3-206ENST00000593074 SF3B6Q9Y3B4 125 aaKnown RBP18.17■□□□□ 0.5
CLIP3-206ENST00000593074 ISPDA4D126 451 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 OR2W5A6NFC9 320 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 PSMD4P55036 377 aaKnown RBP18.16■□□□□ 0.5
CLIP3-206ENST00000593074 CCDC190Q86UF4 302 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 METTL27Q8N6F8 245 aaPredicted RBP18.16■□□□□ 0.5
CLIP3-206ENST00000593074 OR13C2Q8NGS9 318 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 ERVMER34-1Q9H9K5 563 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 PRDM6Q9NQX0 595 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 UGT2A1Q9Y4X1 527 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 SOCS6O14544 535 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 NUDT21O43809 227 aaKnown RBP18.16■□□□□ 0.5
CLIP3-206ENST00000593074 RFPL3O75679 317 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 SPTBP11277 2137 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 BMP7P18075 431 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 CD1CP29017 333 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 CD79BP40259 229 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 GRM7Q14831 915 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 NIPAL3Q6P499 406 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 SMARCD3Q6STE5 483 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 LYSMD2Q8IV50 215 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 CMIPQ8IY22 773 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 SLC25A45Q8N413 288 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 ZNF615Q8N8J6 731 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 PSD4Q8NDX1 1056 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 UFD1Q92890 307 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 PTCHD1Q96NR3 888 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 PELOQ9BRX2 385 aaKnown RBP18.16■□□□□ 0.5
CLIP3-206ENST00000593074 OR10A5Q9H207 317 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 SMURF1Q9HCE7 757 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 ENAMQ9NRM1 1142 aa18.16■□□□□ 0.5
CLIP3-206ENST00000593074 IGHV1OR21-1A0A087WYE8 117 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 FAM183AA6NL82 134 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 TTC36A6NLP5 189 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 J3QRE1 110 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 CLPSP04118 112 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 GABRA5P31644 462 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 RGS19P49795 217 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 PGDP52209 483 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 ATP12AP54707 1039 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms