RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KIAA0513O60268 411 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 NEURL1O76050 574 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 KCNK2O95069 426 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 DBIP07108 87 aaKnown RBP10.88□□□□□ -0.67
DDX39A-219ENST00000592927 FESP07332 822 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 THBS1P07996 1170 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 PABPC4LP0CB38 370 aaKnown RBP10.88□□□□□ -0.67
DDX39A-219ENST00000592927 LCN1P31025 176 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 PRKAR1BP31321 381 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 PIGAP37287 484 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 RFX3P48380 749 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 PSMD4P55036 377 aaKnown RBP10.88□□□□□ -0.67
DDX39A-219ENST00000592927 FBXW4P57775 412 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 RPP38P78345 283 aaKnown RBP10.88□□□□□ -0.67
DDX39A-219ENST00000592927 CHRNEQ04844 493 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 ZNF169Q14929 603 aaPredicted RBP10.88□□□□□ -0.67
DDX39A-219ENST00000592927 LARS2Q15031 903 aaKnown RBP10.88□□□□□ -0.67
DDX39A-219ENST00000592927 NTRK2Q16620 822 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 EIPR1Q53HC9 387 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 TYW3Q6IPR3 259 aaKnown RBP10.88□□□□□ -0.67
DDX39A-219ENST00000592927 DHRS4L2Q6PKH6 230 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 Q6ZS92 163 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 AMIGO2Q86SJ2 522 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 PEX5LQ8IYB4 626 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 PACRGLQ8N7B6 248 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 BCORP1Q8N888 145 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 MDS2Q8NDY4 140 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 FAM110BQ8TC76 370 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 EME1Q96AY2 570 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 RMND5BQ96G75 393 aaPredicted RBP10.88□□□□□ -0.67
DDX39A-219ENST00000592927 ADOQ96SZ5 270 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 TIMMDC1Q9NPL8 285 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 ASF1BQ9NVP2 202 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 B3GNT3Q9Y2A9 372 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 CSAG2Q9Y5P2 127 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 NAV3Q8IVL0 2385 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 DOCK10Q96BY6 2186 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 OR6C70A6NIJ9 312 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 LRRTM2O43300 516 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 HS6ST1O60243 411 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 ABCB7O75027 752 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SLC25A12O75746 678 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 IL33O95760 270 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 IFNW1P05000 195 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 ATP6V1C1P21283 382 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 RPS4Y1P22090 263 aaKnown RBP10.87□□□□□ -0.67
DDX39A-219ENST00000592927 PEX2P28328 305 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 PNLIPRP2P54317 469 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 VLDLRP98155 873 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 EFR3AQ14156 821 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 DUSP7Q16829 419 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.87□□□□□ -0.67
DDX39A-219ENST00000592927 GRAMD1BQ3KR37 738 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 ZNF766Q5HY98 468 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 ZNF311Q5JNZ3 666 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SLC22A10Q63ZE4 541 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 LPCAT4Q643R3 524 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SLC6A19Q695T7 634 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 OR2T5Q6IEZ7 315 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SLC25A25Q6KCM7 469 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 NUP54Q7Z3B4 507 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 MDGA2Q7Z553 956 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 ZNF227Q86WZ6 799 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SVOPLQ8N434 492 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SMYD1Q8NB12 490 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 ICA1LQ8NDH6 482 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 OR10G3Q8NGC4 313 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 OR10Q1Q8NGQ4 319 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 OR2T29Q8NH02 315 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 OR52P1PQ8NH57 321 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 NR4A3Q92570 626 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 DIO2Q92813 273 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 EFHD2Q96C19 240 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SDCCAG3Q96C92 435 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 TMCO6Q96DC7 493 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 ZNF300Q96RE9 604 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-219ENST00000592927 OSBPL10Q9BXB5 764 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SEMA6AQ9H2E6 1030 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 ARMC7Q9H6L4 198 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 KLHL1Q9NR64 748 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 KLHL28Q9NXS3 571 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SLC13A4Q9UKG4 626 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 SLC9A8Q9Y2E8 581 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 DTNAQ9Y4J8 743 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 PCDHGA10Q9Y5H3 936 aa10.87□□□□□ -0.67
DDX39A-219ENST00000592927 NIPBLQ6KC79 2804 aaeCLIP10.87□□□□□ -0.672e-7■□□□□ 8.1
DDX39A-219ENST00000592927 PRRC2CQ9Y520 2896 aaKnown RBP10.86□□□□□ -0.67
DDX39A-219ENST00000592927 AGAP5A6NIR3 686 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 ADAMDEC1O15204 470 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 TSPAN2O60636 221 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 FCMRO60667 390 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 ZG16O60844 167 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 UGT2B11O75310 529 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 LGI1O95970 557 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 MT-ND1P03886 318 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 P04436 131 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 SP1P08047 785 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 IL7RP16871 459 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 RHCEP18577 417 aa10.86□□□□□ -0.67
DDX39A-219ENST00000592927 ARHGDIAP52565 204 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms