RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ETFAP13804 333 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 IL7RP16871 459 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF17P17021 662 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 PGCP20142 388 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 PPIBP23284 216 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 UQCRC1P31930 480 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 CEACAM8P31997 349 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 RYKP34925 604 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 OPRM1P35372 400 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 EIF1AXP47813 144 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 MRPL19P49406 292 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 AGFG1P52594 562 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 CRISP3P54108 245 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 RAC1P63000 192 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 EEF1A1P68104 462 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 KCNJ10P78508 379 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 GUCY1A3Q02108 690 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 PLPPR5Q32ZL2 321 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 GTDC1Q4AE62 458 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 EEF1A1P5Q5VTE0 462 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 METTL21CQ5VZV1 264 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 OR2A2Q6IF42 318 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 TYW3Q6IPR3 259 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 CBLN3Q6UW01 205 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 SEM1Q6ZVN7 128 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 HMGN2P46Q86SG4 172 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 LIX1LQ8IVB5 337 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 MCEMP1Q8IX19 187 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 PEX5LQ8IYB4 626 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 C9orf106Q8NAJ2 232 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 MBD3L2Q8NHZ7 208 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 FBXO27Q8NI29 283 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 GPR119Q8TDV5 335 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 OIT3Q8WWZ8 545 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 STON2Q8WXE9 905 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 TMEM234Q8WY98 164 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 INTS12Q96CB8 462 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 AURKBQ96GD4 344 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 REXO5Q96IC2 774 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 THUMPD3Q9BV44 507 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 ARMC7Q9H6L4 198 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 TMEM185BQ9H7F4 350 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 TIGARQ9NQ88 270 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 MRGBPQ9NV56 204 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 FGFR1OP2Q9NVK5 253 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 PAQR5Q9NXK6 330 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF629Q9UEG4 869 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 LEF1Q9UJU2 399 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 MCTS1Q9ULC4 181 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 NDUFAF1Q9Y375 327 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 PCDHB14Q9Y5E9 798 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 GPC6Q9Y625 555 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 PCNX1Q96RV3 2341 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 NUP214P35658 2090 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-227ENST00000591849 A0A1W2PP18 115 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 KDM4EB2RXH2 506 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-227ENST00000591849 B4DXG7 233 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 H0YC42 278 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 C19orf84I3L1E1 186 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 TOXO94900 526 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 RCBTB2O95199 551 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 PLGP00747 810 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-227ENST00000591849 C1QCP02747 245 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 BCHEP06276 602 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 DBIP07108 87 aaKnown RBP9.08□□□□□ -0.96
BRCA1-227ENST00000591849 LINGO3P0C6S8 592 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 ADH6P28332 368 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 SLC7A1P30825 629 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 SFTPDP35247 375 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 MDH1P40925 334 aaKnown RBP9.08□□□□□ -0.96
BRCA1-227ENST00000591849 CPA2P48052 419 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 SUCLG1P53597 346 aaKnown RBP9.08□□□□□ -0.96
BRCA1-227ENST00000591849 TPD52P55327 224 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-227ENST00000591849 CLDN20P56880 219 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 CARD18P57730 90 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 FOXF1Q12946 379 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 FGFBP1Q14512 234 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 LARS2Q15031 903 aaKnown RBP9.08□□□□□ -0.96
BRCA1-227ENST00000591849 QPRTQ15274 297 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 RGNQ15493 299 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 HBMQ6B0K9 141 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 POMZP3Q6PJE2 187 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 FRRS1Q6ZNA5 592 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 FUNDC1Q8IVP5 155 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 LILRA2Q8N149 483 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 CNEP1R1Q8N9A8 125 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 OR2V1Q8NHB1 315 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 WDR60Q8WVS4 1066 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 PMM1Q92871 262 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 ZFP3Q96NJ6 502 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 PAIP1Q9H074 479 aaKnown RBP9.08□□□□□ -0.96
BRCA1-227ENST00000591849 SAP130Q9H0E3 1048 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 SLC24A3Q9HC58 644 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 SLC6A13Q9NSD5 602 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 KCNE5Q9UJ90 142 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 ICAM5Q9UMF0 924 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 CORO2BQ9UQ03 480 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 L3MBTL1Q9Y468 752 aa9.08□□□□□ -0.96
BRCA1-227ENST00000591849 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 A0A0G2JPF8 293 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms