RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 DEFB126Q9BYW3 111 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 CRNKL1Q9BZJ0 848 aaKnown RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 POLR1EQ9GZS1 481 aaKnown RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 CAB39LQ9H9S4 337 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 ZNF275Q9NSD4 429 aaPredicted RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 VNN3Q9NY84 501 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 SPRR3Q9UBC9 169 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 GNG12Q9UBI6 72 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 KLHL21Q9UJP4 597 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 PDE10AQ9Y233 779 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 VSIG4Q9Y279 399 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 OARD1Q9Y530 152 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 PPIAL4AQ9Y536 164 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 FLVCR1Q9Y5Y0 555 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 SRCAPQ6ZRS2 3230 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 CROCCQ5TZA2 2017 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 CHD4Q14839 1912 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 MBLAC1A4D2B0 266 aaPredicted RBP2.54□□□□□ -2
SMAD4-207ENST00000589076 H3BMQ9 156 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 WWP2O00308 870 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 OR7A17O14581 309 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 CDX4O14627 284 aaPredicted RBP2.54□□□□□ -2
SMAD4-207ENST00000589076 MSH4O15457 936 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 TPST2O60704 377 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 GPX5O75715 221 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 SERF1AO75920 110 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 TM7SF2O76062 418 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 F10P00742 488 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 STSP08842 583 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 GIG44P09565 113 aaPredicted RBP2.54□□□□□ -2
SMAD4-207ENST00000589076 H2BFMP0C1H6 154 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 P0C879 139 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 DUX4L4P0CJ87 422 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 CPN1P15169 458 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 ADORA2BP29275 332 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 UGT1A3P35503 534 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 PRPHP41219 470 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 IFNAR2P48551 515 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 RGS4P49798 205 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 CBX1P83916 185 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 EWSR1Q01844 656 aaKnown RBP eCLIP2.54□□□□□ -2
SMAD4-207ENST00000589076 OC90Q02509 493 aaPredicted RBP2.54□□□□□ -2
SMAD4-207ENST00000589076 RAB40BQ12829 278 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 SLC5A12Q1EHB4 618 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 SBK1Q52WX2 424 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 ATAD3BQ5T9A4 648 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 DNM1P46Q6ZS02 220 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 C16orf62Q7Z3J2 963 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 PPP1R42Q7Z4L9 355 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 GPR65Q8IYL9 337 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 LINC01561Q8N1V8 128 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 LRRC43Q8N309 656 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 SYT14Q8NB59 555 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 OR2A12Q8NGT7 310 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 TRMT10AQ8TBZ6 339 aaKnown RBP2.54□□□□□ -2
SMAD4-207ENST00000589076 TRIM44Q96DX7 344 aaPredicted RBP2.54□□□□□ -2
SMAD4-207ENST00000589076 SH3YL1Q96HL8 342 aaPredicted RBP2.54□□□□□ -2
SMAD4-207ENST00000589076 C12orf66Q96MD2 445 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 TTC25Q96NG3 672 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 MEAF6Q9HAF1 191 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 ELOVL3Q9HB03 270 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 TNFRSF19Q9NS68 423 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 RNF14Q9UBS8 474 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 ZNF221Q9UK13 617 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 CLEC4EQ9ULY5 219 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 RPH3ALQ9UNE2 315 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 MAD1L1Q9Y6D9 718 aa2.54□□□□□ -2
SMAD4-207ENST00000589076 ATAD2BQ9ULI0 1458 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 PNPLA6Q8IY17 1366 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 IGHV2-70DA0A0C4DH43 119 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 PP2D1A8MPX8 630 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 H0YCG3 227 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 K7EQM0 130 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 GMFGO60234 142 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 PGK1P00558 417 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 CALB2P22676 271 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 NMT1P30419 496 aaKnown RBP2.53□□□□□ -2
SMAD4-207ENST00000589076 KIR2DS2P43631 304 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 STARP49675 285 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 LIM2P55344 173 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 IGLV3-21P80748 117 aaPredicted RBP2.53□□□□□ -2
SMAD4-207ENST00000589076 SPIBQ01892 262 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 MXD4Q14582 209 aaPredicted RBP2.53□□□□□ -2
SMAD4-207ENST00000589076 TIGITQ495A1 244 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 OR2B11Q5JQS5 317 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 CFAP157Q5JU67 520 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 SPATA46Q5T0L3 261 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 PYHIN1Q6K0P9 492 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 KIAA1328Q86T90 577 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 OR2T3Q8NH03 318 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 CTNNBL1Q8WYA6 563 aaPredicted RBP2.53□□□□□ -2
SMAD4-207ENST00000589076 PSMG2Q969U7 264 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 ZNF607Q96SK3 696 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 RIT2Q99578 217 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 TXN2Q99757 166 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 TUBGCP2Q9BSJ2 902 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 ZNF385DQ9H6B1 395 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 ZNF702PQ9H963 129 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 NANSQ9NR45 359 aa2.53□□□□□ -2
SMAD4-207ENST00000589076 PAK1IP1Q9NWT1 392 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms