RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 LCN10Q6JVE6 187 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 CAPN13Q6MZZ7 669 aaPredicted RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 FAM199XQ6PEV8 388 aaPredicted RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 ZNF782Q6ZMW2 699 aaPredicted RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 ZNF66Q6ZN08 573 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 CENPVQ7Z7K6 275 aaPredicted RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 PATL1Q86TB9 770 aaKnown RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 THOC6Q86W42 341 aaKnown RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 PAQR7Q86WK9 346 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 GALNT16Q8N428 558 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 METTL27Q8N6F8 245 aaPredicted RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 RBMXL3Q8N7X1 1067 aaKnown RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 AENQ8WTP8 325 aaKnown RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 MR1Q95460 341 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 ESAMQ96AP7 390 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 RHBDF1Q96CC6 855 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 SELENOSQ9BQE4 189 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 TMEM79Q9BSE2 394 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 NUDT9Q9BW91 350 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 CNOT10Q9H9A5 744 aaKnown RBP7.04□□□□□ -1.28
ATG4D-210ENST00000588972 GPR83Q9NYM4 423 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 TBK1Q9UHD2 729 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 PLCL2Q9UPR0 1127 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 ACOT9Q9Y305 439 aa7.04□□□□□ -1.28
ATG4D-210ENST00000588972 M0QZ24 198 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 UBXN8O00124 270 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 P2RX6O15547 441 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 KERAO60938 352 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 KLHL2O95198 593 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 G6PDP11413 515 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 VPREB1P12018 145 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 PRF1P14222 555 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 DNASE1P24855 282 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 SLC6A12P48065 614 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 CDKL1Q00532 357 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 HKDC1Q2TB90 917 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 FAM98BQ52LJ0 330 aaKnown RBP7.03□□□□□ -1.28
ATG4D-210ENST00000588972 FAM69BQ5VUD6 431 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 ZNF425Q6IV72 752 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 ZNF517Q6ZMY9 492 aaPredicted RBP7.03□□□□□ -1.28
ATG4D-210ENST00000588972 ISCA2Q86U28 154 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 C17orf64Q86WR6 236 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 DSELQ8IZU8 1212 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 FDCSPQ8NFU4 85 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 OR1J2Q8NGS2 313 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 TMEM163Q8TC26 289 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 ANKRD7Q92527 254 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 NEIL2Q969S2 332 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 ZBTB9Q96C00 473 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 SNRNP40Q96DI7 357 aaKnown RBP7.03□□□□□ -1.28
ATG4D-210ENST00000588972 C19orf60Q96EN9 201 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 PRAP1Q96NZ9 151 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 SIGLEC11Q96RL6 698 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 ATOH8Q96SQ7 321 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 DDOQ99489 341 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 PARD6BQ9BYG5 372 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 SLC7A5P2Q9GIP4 190 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 CHRNA10Q9GZZ6 450 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 SPNS1Q9H2V7 528 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 NMRAL1Q9HBL8 299 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 WWOXQ9NZC7 414 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 CD274Q9NZQ7 290 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 MSRB1Q9NZV6 116 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 PSMC3IPQ9P2W1 217 aaPredicted RBP7.03□□□□□ -1.28
ATG4D-210ENST00000588972 DHCR7Q9UBM7 475 aaKnown RBP7.03□□□□□ -1.28
ATG4D-210ENST00000588972 SNX7Q9UNH6 387 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 ENTPD4Q9Y227 616 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 SLC22A14Q9Y267 594 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 KLK4Q9Y5K2 254 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 CROCCQ5TZA2 2017 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 DCHS2Q6V1P9 2916 aa7.03□□□□□ -1.28
ATG4D-210ENST00000588972 A0A0U1RQK1 487 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ZNF320A2RRD8 509 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 OR6C76A6NM76 312 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 H0YGG7 62 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 GOLGA8RI6L899 631 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 LCMT2O60294 686 aaKnown RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 PROP1O75360 226 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ERLIN1O75477 346 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ALPPP05187 535 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 SNRPAP09012 282 aaKnown RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 EZRP15311 586 aaKnown RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ACHEP22303 614 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 RORAP35398 523 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 HNMTP50135 292 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 PROK1P58294 105 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 CSNK1G2P78368 415 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ABATP80404 500 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 FAM83EQ2M2I3 478 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ZNF674Q2M3X9 581 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 CCDC92Q53HC0 331 aaPredicted RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 TECRLQ5HYJ1 363 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 WASHC2DQ5SRD0 308 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 NSUN5P2Q63ZY6 315 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 PAPD4Q6PIY7 484 aaKnown RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 FAM198BQ6UWH4 519 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 VN1R4Q7Z5H5 301 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 TMPRSS11BQ86T26 416 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 TMCO5AQ8N6Q1 288 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ZNF740Q8NDX6 193 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms