RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 MRASO14807 208 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 HNRNPCL1O60812 293 aaKnown RBP18.26■□□□□ 0.51
DDX39A-207ENST00000588542 DNAJA2O60884 412 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 HOXD4P09016 255 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-207ENST00000588542 HNRNPCL4P0DMR1 293 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 GABRA1P14867 456 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 PSMA4P25789 261 aaKnown RBP18.26■□□□□ 0.51
DDX39A-207ENST00000588542 ZNF41P51814 821 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-207ENST00000588542 CLDN18P56856 261 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 MTPNP58546 118 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 KCNJ10P78508 379 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 CYLC2Q14093 348 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-207ENST00000588542 TOMM34Q15785 309 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-207ENST00000588542 GCNT6Q5T4J0 391 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 C1orf185Q5T7R7 199 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 PRAMEF8Q5VWM4 474 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 PRAMEF7Q5VXH5 474 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 ENPP6Q6UWR7 440 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 EID3Q8N140 333 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 GTPBP8Q8N3Z3 284 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-207ENST00000588542 POU5F2Q8N7G0 328 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 OR5W2Q8NH69 310 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 ITLN2Q8WWU7 325 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-207ENST00000588542 PIGQQ9BRB3 760 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 SLC39A3Q9BRY0 314 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 TMEM38AQ9H6F2 299 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 BCL2L10Q9HD36 194 aa18.26■□□□□ 0.51
DDX39A-207ENST00000588542 MED12LQ86YW9 2145 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 TMEM247A6NEH6 219 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 DBIP07108 87 aaKnown RBP18.25■□□□□ 0.51
DDX39A-207ENST00000588542 UBTFL6P0CB48 400 aaPredicted RBP18.25■□□□□ 0.51
DDX39A-207ENST00000588542 ZNF708P17019 499 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 ZNF17P17021 662 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 CLDN15P56746 228 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 NUP107P57740 925 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 GNA13Q14344 377 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 BCL2A1Q16548 175 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 MMEL1Q495T6 779 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 ACSF3Q4G176 576 aaPredicted RBP18.25■□□□□ 0.51
DDX39A-207ENST00000588542 NANOGP8Q6NSW7 305 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 B3GNT6Q6ZMB0 384 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 TMCO5AQ8N6Q1 288 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 TOR1AIP2Q8NFQ8 470 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 NFKBIDQ8NI38 313 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 RP9Q8TA86 221 aaKnown RBP18.25■□□□□ 0.51
DDX39A-207ENST00000588542 WDR60Q8WVS4 1066 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 CNOT9Q92600 299 aaKnown RBP18.25■□□□□ 0.51
DDX39A-207ENST00000588542 ZBTB8AQ96BR9 441 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 LRRC58Q96CX6 371 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 PSMG3-AS1Q96PY0 264 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 TTYH2Q9BSA4 534 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 THUMPD3Q9BV44 507 aaKnown RBP18.25■□□□□ 0.51
DDX39A-207ENST00000588542 KAT8Q9H7Z6 458 aaKnown RBP18.25■□□□□ 0.51
DDX39A-207ENST00000588542 NANOGQ9H9S0 305 aa18.25■□□□□ 0.51
DDX39A-207ENST00000588542 LINC01387J3KSC0 135 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 CYP7B1O75881 506 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 PGM3O95394 542 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 NUDT14O95848 222 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 NPPAP01160 153 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 GLI4P10075 376 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 PEPDP12955 493 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 COX4I1P13073 169 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 NID1P14543 1247 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 IL7RP16871 459 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 PTGER4P35408 488 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 SRYQ05066 204 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 PMPCAQ10713 525 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 TMEM211Q6ICI0 200 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 RPTNQ6XPR3 784 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 SEM1Q6ZVN7 128 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 VRK2Q86Y07 508 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 PTOV1Q86YD1 416 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 CMIPQ8IY22 773 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 PEX5LQ8IYB4 626 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 METTL25Q8N6Q8 603 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 OR52P1PQ8NH57 321 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 RCN3Q96D15 328 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 RNF145Q96MT1 663 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 TUBA1CQ9BQE3 449 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 RSPO3Q9BXY4 272 aaPredicted RBP18.24■□□□□ 0.51
DDX39A-207ENST00000588542 DNAJB12Q9NXW2 375 aaKnown RBP18.24■□□□□ 0.51
DDX39A-207ENST00000588542 CACNA1CQ13936 2221 aa18.24■□□□□ 0.51
DDX39A-207ENST00000588542 ASH1LQ9NR48 2969 aaKnown RBP18.24■□□□□ 0.51
DDX39A-207ENST00000588542 FAM47E-STBD1D6RA91 191 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 H0YC42 278 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 H3BML4 177 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 ETV2O00321 342 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-207ENST00000588542 ADAM11O75078 769 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 NTN1O95631 604 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 EPPINO95925 133 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 PRKCAP17252 672 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 POU3F2P20265 443 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-207ENST00000588542 GZMMP51124 257 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 CCR4P51679 360 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 SUCLG1P53597 346 aaKnown RBP18.23■□□□□ 0.51
DDX39A-207ENST00000588542 TPD52P55327 224 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-207ENST00000588542 CLDN20P56880 219 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 EEF1A1P68104 462 aaKnown RBP18.23■□□□□ 0.51
DDX39A-207ENST00000588542 CDK6Q00534 326 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 FOXF1Q12946 379 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms