RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ZNF239Q16600 458 aaKnown RBP12.8□□□□□ -0.36
VMP1-206ENST00000587945 TMEM176BQ3YBM2 270 aaPredicted RBP12.8□□□□□ -0.36
VMP1-206ENST00000587945 ALKBH2Q6NS38 261 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 MTERF4Q7Z6M4 381 aaKnown RBP12.8□□□□□ -0.36
VMP1-206ENST00000587945 BIVMQ86UB2 503 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 WFDC8Q8IUA0 241 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 CLECL1Q8IZS7 167 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 ZNF527Q8NB42 609 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 RFWD2Q8NHY2 731 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 PPP1R14CQ8TAE6 165 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 SFXN5Q8TD22 340 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 GPR119Q8TDV5 335 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 PIGTQ969N2 578 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 ZBTB9Q96C00 473 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 ARSGQ96EG1 525 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 PERPQ96FX8 193 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 PIP5K1AQ99755 562 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 BHLHE41Q9C0J9 482 aaPredicted RBP12.8□□□□□ -0.36
VMP1-206ENST00000587945 ACTR6Q9GZN1 396 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 SERHL2Q9H4I8 314 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 GLRX2Q9NS18 164 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.8□□□□□ -0.36
VMP1-206ENST00000587945 V9GYY5 206 aaPredicted RBP12.8□□□□□ -0.36
VMP1-206ENST00000587945 FLNAP21333 2647 aaKnown RBP12.79□□□□□ -0.36
VMP1-206ENST00000587945 H3BNH8 94 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 PLAUP00749 431 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 TUBBP07437 444 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 NID1P14543 1247 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 FPR1P21462 350 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 CASP9P55211 416 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 EMX2Q04743 252 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 LTBQ06643 244 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 OR4F3Q6IEY1 312 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 EMBQ6PCB8 327 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 NUFIP2Q7Z417 695 aaKnown RBP12.79□□□□□ -0.36
VMP1-206ENST00000587945 C6orf120Q7Z4R8 191 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 CIARTQ8N365 385 aaPredicted RBP12.79□□□□□ -0.36
VMP1-206ENST00000587945 NATD1Q8N6N6 113 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 ZNF781Q8N8C0 355 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 CAVIN3Q969G5 261 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 SDF2Q99470 211 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 AKTIPQ9H8T0 292 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 DTNAQ9Y4J8 743 aa12.79□□□□□ -0.36
VMP1-206ENST00000587945 IGHV3-15A0A0B4J1V0 119 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 CENPVL1A0A0U1RR11 272 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 A0A1W2PNR3 127 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 PPP3CBP16298 524 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 PRKCAP17252 672 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 MATN1P21941 496 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 ENPP1P22413 925 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 ELK4P28324 431 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 ADH6P28332 368 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 CCR4P51679 360 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 SUMO3P55854 103 aaPredicted RBP12.78□□□□□ -0.36
VMP1-206ENST00000587945 CLDN8P56748 225 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 ZNF844Q08AG5 666 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 GPR68Q15743 365 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 CHI3L2Q15782 390 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 KRT71Q3SY84 523 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 BEX5Q5H9J7 111 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 TMEM201Q5SNT2 666 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 PDZK1Q5T2W1 519 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 GTF2IRD2BQ6EKJ0 949 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 C20orf204Q6ZNR8 217 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 BEND4Q6ZU67 534 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 YTHDF3Q7Z739 585 aaKnown RBP12.78□□□□□ -0.36
VMP1-206ENST00000587945 GTF2IRD2Q86UP8 949 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 STK32CQ86UX6 486 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 TUSC5Q8IXB3 177 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 LRRC75A-AS1Q8N1F1 130 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 TMCO5AQ8N6Q1 288 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 OR5W2Q8NH69 310 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 RNF128Q8TEB7 428 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 MOAP1Q96BY2 351 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 PLPPR2Q96GM1 343 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 REXO5Q96IC2 774 aaKnown RBP12.78□□□□□ -0.36
VMP1-206ENST00000587945 Q96MF0 132 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 TMEM109Q9BVC6 243 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 C20orf27Q9GZN8 174 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 COQ10BQ9H8M1 238 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 TIGARQ9NQ88 270 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 NOP53Q9NZM5 478 aaKnown RBP12.78□□□□□ -0.36
VMP1-206ENST00000587945 KCNE5Q9UJ90 142 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 ACTL7BQ9Y614 415 aa12.78□□□□□ -0.36
VMP1-206ENST00000587945 GPC6Q9Y625 555 aaPredicted RBP12.78□□□□□ -0.36
VMP1-206ENST00000587945 RNF103-CHMP3A0A140T963 221 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 SERINC4A6NH21 518 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 ESPNB1AK53 854 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 H7C1Q1 480 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 FCMRO60667 390 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 CYP7B1O75881 506 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 SERPINE1P05121 402 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 PABPC4LP0CB38 370 aaKnown RBP12.77□□□□□ -0.37
VMP1-206ENST00000587945 UBL4AP11441 157 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 C21orf58P58505 322 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 ABCE1P61221 599 aaKnown RBP12.77□□□□□ -0.37
VMP1-206ENST00000587945 MAD2L1Q13257 205 aaPredicted RBP12.77□□□□□ -0.37
VMP1-206ENST00000587945 QPRTQ15274 297 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms