RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 NPIPA8P0DM63 369 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 ADH6P28332 368 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 RPL3P39023 403 aaKnown RBP17.22■□□□□ 0.35
TRAF4-216ENST00000586813 RNF144AP50876 292 aaPredicted RBP17.22■□□□□ 0.35
TRAF4-216ENST00000586813 P2RX1P51575 399 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 KLHL26Q53HC5 615 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.22■□□□□ 0.351e-8■■■□□ 18
TRAF4-216ENST00000586813 SFRP5Q5T4F7 317 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 ADAM5Q6NVV9 412 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 CDC73Q6P1J9 531 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 FCRLAQ7L513 359 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 TUSC5Q8IXB3 177 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 OR7A2PQ8NGA2 310 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 FBXO27Q8NI29 283 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 HOXD1Q9GZZ0 328 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 COQ10BQ9H8M1 238 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 GP6Q9HCN6 339 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 GIMAP2Q9UG22 337 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 CARD8Q9Y2G2 431 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 ACTL7BQ9Y614 415 aa17.22■□□□□ 0.35
TRAF4-216ENST00000586813 GPC6Q9Y625 555 aaPredicted RBP17.22■□□□□ 0.35
TRAF4-216ENST00000586813 H3BNH8 94 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 ZNF195O14628 629 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 SOX30O94993 753 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 NTN1O95631 604 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 FGF4P08620 206 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 LAMP1P11279 417 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 IL32P24001 234 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 TNK1Q13470 666 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 UGT3A2Q3SY77 523 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 DCST2Q5T1A1 773 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 HOMEZQ8IX15 550 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 LILRB1Q8NHL6 650 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-216ENST00000586813 PSMA8Q8TAA3 256 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 ZFP90Q8TF47 636 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 FBXW5Q969U6 566 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 ACTRT3Q9BYD9 372 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 ESRP2Q9H6T0 727 aaKnown RBP17.21■□□□□ 0.35
TRAF4-216ENST00000586813 TRAF6Q9Y4K3 522 aa17.21■□□□□ 0.35
TRAF4-216ENST00000586813 ANK3Q12955 4377 aaKnown RBP17.2■□□□□ 0.34
TRAF4-216ENST00000586813 CLOCKO15516 846 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 PRKCAP17252 672 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 MAPK1P28482 360 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 CCT3P49368 545 aaKnown RBP17.2■□□□□ 0.34
TRAF4-216ENST00000586813 KRTAP1-1Q07627 177 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 TP53BP2Q13625 1128 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 PTGR1Q14914 329 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 TAB1Q15750 504 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 TOMM34Q15785 309 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-216ENST00000586813 NDUFAF6Q330K2 333 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 TMEM176BQ3YBM2 270 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-216ENST00000586813 XKR7Q5GH72 579 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 ARL13AQ5H913 290 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-216ENST00000586813 NCMAPQ5T1S8 102 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 ZNF619Q8N2I2 560 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 BANPQ8N9N5 519 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 EIF1ADQ8N9N8 165 aaKnown RBP17.2■□□□□ 0.34
TRAF4-216ENST00000586813 LRRN4CLQ8ND94 238 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 OR56A1Q8NGH5 318 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 ADAMTS15Q8TE58 950 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 OR5P2Q8WZ92 322 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 KISS1RQ969F8 398 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-216ENST00000586813 PPP3R2Q96LZ3 170 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 CXorf36Q9H7Y0 433 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 NGBQ9NPG2 151 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 GPATCH2Q9NW75 528 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 MKS1Q9NXB0 559 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 ADAM21Q9UKJ8 722 aa17.2■□□□□ 0.34
TRAF4-216ENST00000586813 FAF1Q9UNN5 650 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-216ENST00000586813 NPIPB9F8W1W9 429 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 OVOL3O00110 214 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 NPHS1O60500 1241 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 PRKD3O94806 890 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 CD3EP07766 207 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 YES1P07947 543 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 SOD3P08294 240 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 KRT16P08779 473 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 ALDH3A1P30838 453 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 ATP12AP54707 1039 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 SELENBP1Q13228 472 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 VEZF1Q14119 521 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 P2RY6Q15077 328 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 CLEC12BQ2HXU8 276 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 SPDYE7PQ495Y7 208 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 SEZ6L2Q6UXD5 910 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 ATG4DQ86TL0 474 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-216ENST00000586813 SLC43A2Q8N370 569 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 ATP6V1C2Q8NEY4 427 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 AGR3Q8TD06 166 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 GPR119Q8TDV5 335 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 HSD17B8Q92506 261 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 APOPT1Q96IL0 206 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 MRGPRX4Q96LA9 322 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 POTEKPQ9BYX7 375 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 ANKZF1Q9H8Y5 726 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 EML4Q9HC35 981 aaKnown RBP17.19■□□□□ 0.34
TRAF4-216ENST00000586813 ATAD3AQ9NVI7 634 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 KCNE3Q9Y6H6 103 aa17.19■□□□□ 0.34
TRAF4-216ENST00000586813 GTPBP1O00178 669 aaKnown RBP17.18■□□□□ 0.34
TRAF4-216ENST00000586813 PEX11AO75192 247 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms