RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 C9JVG2 144 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 E7EQL1 145 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 NPIPB9F8W1W9 429 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 SMAD9O15198 467 aaKnown RBP10.5□□□□□ -0.73
BRCA1-225ENST00000586385 AKAP10O43572 662 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 PRKD3O94806 890 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 PGM3O95394 542 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 H6PDO95479 791 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 PABPC4LP0CB38 370 aaKnown RBP10.5□□□□□ -0.73
BRCA1-225ENST00000586385 PRKCAP17252 672 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 COX5AP20674 150 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 IGHV1-2P23083 117 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 PRPH2P23942 346 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 LCN1P31025 176 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 GPC1P35052 558 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 EIF1P41567 113 aaKnown RBP10.5□□□□□ -0.73
BRCA1-225ENST00000586385 OR3A2P47893 321 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 CDH11P55287 796 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 SRSF2Q01130 221 aaKnown RBP10.5□□□□□ -0.73
BRCA1-225ENST00000586385 SPOCK1Q08629 439 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 IMPG1Q17R60 797 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 VPS26BQ4G0F5 336 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 KLHL26Q53HC5 615 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 PDSS1Q5T2R2 415 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 CLEC6AQ6EIG7 209 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 ZYG11AQ6WRX3 759 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 B3GLCTQ6Y288 498 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 Q6ZSR9 355 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 FRMD7Q6ZUT3 714 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 LCA5Q86VQ0 697 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 MISPQ8IVT2 679 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 CEP70Q8NHQ1 597 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 CLHC1Q8NHS4 586 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 GPR119Q8TDV5 335 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 CDS1Q92903 461 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 ZNF775Q96BV0 537 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-225ENST00000586385 TSSK3Q96PN8 268 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 ZNF300Q96RE9 604 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-225ENST00000586385 TUBB1Q9H4B7 451 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 REEP4Q9H6H4 257 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 BARX1Q9HBU1 254 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-225ENST00000586385 NGBQ9NPG2 151 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 GIN1Q9NXP7 522 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 BAIAP2L1Q9UHR4 511 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 CARD8Q9Y2G2 431 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 SNX8Q9Y5X2 465 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 ACTL7BQ9Y614 415 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 KCNE3Q9Y6H6 103 aa10.5□□□□□ -0.73
BRCA1-225ENST00000586385 ELOA3DA6NLF2 546 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ETV2O00321 342 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-225ENST00000586385 SCDO00767 359 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ABCD4O14678 606 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 RGS14O43566 566 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 SEC22BO75396 215 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ABHD2P08910 425 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ALOX5P09917 674 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 PYGBP11216 843 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 VLDLRP98155 873 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 LOXL1Q08397 574 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-225ENST00000586385 PPA1Q15181 289 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 STK11Q15831 433 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ELOA3BQ3SY89 546 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 SLC25A53Q5H9E4 307 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 LRIG3Q6UXM1 1119 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ARIH2OSQ8N7S6 290 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 COX18Q8N8Q8 333 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ATP6V1C2Q8NEY4 427 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ELOA3Q8NG57 546 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 PHOSPHO1Q8TCT1 267 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ZFP90Q8TF47 636 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 IFT81Q8WYA0 676 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 FAM120BQ96EK7 910 aaKnown RBP10.49□□□□□ -0.73
BRCA1-225ENST00000586385 TNFRSF13CQ96RJ3 184 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 CCT7Q99832 543 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 RHNO1Q9BSD3 238 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 BTBD2Q9BX70 525 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 CACNG6Q9BXT2 260 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ANKZF1Q9H8Y5 726 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 HHATLQ9HCP6 504 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 RRAGDQ9NQL2 400 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-225ENST00000586385 ACSS1Q9NUB1 689 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-225ENST00000586385 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.49□□□□□ -0.733e-7■■■■■ 41.1
BRCA1-225ENST00000586385 PLCE1Q9P212 2302 aa10.49□□□□□ -0.73
BRCA1-225ENST00000586385 A0A1W2PPM1 405 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 CYTIPO60759 359 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 PROCP04070 461 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 HMGN2P05204 90 aaKnown RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 NTF4P34130 210 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 P2RX1P51575 399 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 NUDT6P53370 316 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 FOXG1P55316 489 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 RAC3P60763 192 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 POU6F2P78424 691 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 LASP1Q14847 261 aaKnown RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 NRF1Q16656 503 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 RFTN2Q52LD8 501 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 TIMM23BQ5SRD1 257 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 ZCCHC12Q6PEW1 402 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 SZRD1Q7Z422 152 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 SLC43A2Q8N370 569 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms