RNA–Protein interactions for RNA: ENST00000585223.1

DDX5-233, Transcript of DEAD-box helicase 5, human

TSL 2

Gene DDX5, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX5-233	ENST00000585223	LIN52	Q52LA3	116 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	PRAMEF8	Q5VWM4	474 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	PRAMEF7	Q5VXH5	474 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223		Q6ZPB1	254 aa	Predicted RBP	10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	EIF3M	Q7L2H7	374 aa	Known RBP	10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	SERPINA11	Q86U17	422 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	ZGRF1	Q86YA3	2104 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	SLC15A3	Q8IY34	581 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	CLIP4	Q8N3C7	705 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	RPRML	Q8N4K4	120 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	C11orf65	Q8NCR3	313 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	HIPK4	Q8NE63	616 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	RNF145	Q96MT1	663 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	ZNF583	Q96ND8	569 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	ECSIT	Q9BQ95	431 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	LAT2	Q9GZY6	243 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	SLC35A3	Q9Y2D2	325 aa		10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	GPC6	Q9Y625	555 aa	Predicted RBP	10.11	□□□□□ -0.79
DDX5-233	ENST00000585223	KIAA1549	Q9HCM3	1950 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	MED12	Q93074	2177 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	KDM4E	B2RXH2	506 aa	Predicted RBP	10.1	□□□□□ -0.79
DDX5-233	ENST00000585223		H3BML4	177 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	TPST1	O60507	370 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	SEMA7A	O75326	666 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	THBS1	P07996	1170 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	LINGO3	P0C6S8	592 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	GKN3P	P0CG01	181 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	RNF224	P0DH78	156 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	PRG2	P13727	222 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	IL11	P20809	199 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	MSX1	P28360	303 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	RYK	P34925	604 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	ADH7	P40394	386 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	CA7	P43166	264 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	ZNF41	P51814	821 aa	Predicted RBP	10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	CRYBA2	P53672	197 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	SUMO3	P55854	103 aa	Predicted RBP	10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	PCBP3	P57721	371 aa	Known RBP	10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	SLC25A3	Q00325	362 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	LIPE	Q05469	1076 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	RBBP4	Q09028	425 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	KRT72	Q14CN4	511 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	ZNF311	Q5JNZ3	666 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	RNF220	Q5VTB9	566 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	VASN	Q6EMK4	673 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	PLXDC2	Q6UX71	529 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	ARPIN	Q7Z6K5	226 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	FJX1	Q86VR8	437 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	DOLPP1	Q86YN1	238 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	METTL25	Q8N6Q8	603 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	TOR1AIP2	Q8NFQ8	470 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	OR5W2	Q8NH69	310 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	GPR119	Q8TDV5	335 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	OIT3	Q8WWZ8	545 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	SMPDL3B	Q92485	455 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	ABTB1	Q969K4	478 aa	Predicted RBP	10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	SARAF	Q96BY9	339 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	TIMP4	Q99727	224 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	SH3GL1	Q99961	368 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	SPATA9	Q9BWV2	254 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	CAMK2A	Q9UQM7	478 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	HEATR5A	Q86XA9	2040 aa		10.1	□□□□□ -0.79
DDX5-233	ENST00000585223	CDHR4	A6H8M9	788 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	OR14I1	A6ND48	311 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	FAM47E-STBD1	D6RA91	191 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223		H0YC42	278 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	BCKDK	O14874	412 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	UBOX5	O94941	541 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	OPN1LW	P04000	364 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	STS	P08842	583 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	T-ENOL	P0DO92	83 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	ESRRA	P11474	423 aa	Predicted RBP	10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	ETS2	P15036	469 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	PRKCA	P17252	672 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	POU3F2	P20265	443 aa	Predicted RBP	10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	PSMA4	P25789	261 aa	Known RBP	10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	SHC1	P29353	583 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	GSK3B	P49841	420 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	LHX2	P50458	406 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	TPD52	P55327	224 aa	Predicted RBP	10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	MXRA7	P84157	204 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	HOXC5	Q00444	222 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	DMTN	Q08495	405 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	EPS8	Q12929	822 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	CBFB	Q13951	182 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	GXYLT1	Q4G148	440 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	NHSL2	Q5HYW2	709 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	WLS	Q5T9L3	541 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	ZNF585A	Q6P3V2	769 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	CMIP	Q8IY22	773 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	UBQLNL	Q8IYU4	475 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	MICU2	Q8IYU8	434 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	MARVELD2	Q8N4S9	558 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	RNF148	Q8N7C7	305 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	SMYD1	Q8NB12	490 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	OR2T12	Q8NG77	320 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	GPR32P1	Q8NGA4	272 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	PMM1	Q92871	262 aa		10.09	□□□□□ -0.79
DDX5-233	ENST00000585223	TAMM41	Q96BW9	452 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms