RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SAP130Q9H0E3 1048 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 QRSL1Q9H0R6 528 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 TMEM185BQ9H7F4 350 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 TMEM45AQ9NWC5 275 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 P2RX2Q9UBL9 471 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 ICAM5Q9UMF0 924 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 L3MBTL1Q9Y468 752 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 PCDHB14Q9Y5E9 798 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 KIAA1549Q9HCM3 1950 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 C7orf72A4D263 438 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 TMEM247A6NEH6 219 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 EIF1AYO14602 144 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 HNRNPRO43390 633 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 OPN1LWP04000 364 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 BCHEP06276 602 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 LINGO3P0C6S8 592 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 TMIGD3P0DMS9 266 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 EIF1P41567 113 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 AGFG1P52594 562 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF136P52737 540 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 ARFIP2P53365 341 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 MVDP53602 400 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 RPS3AP61247 264 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 SKP2Q13309 424 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 CBFBQ13951 182 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 FGFBP1Q14512 234 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 TOMM34Q15785 309 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 SGCBQ16585 318 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 SLC25A35Q3KQZ1 300 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 PAGE3Q5JUK9 113 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 PPP4R4Q6NUP7 873 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 LRRC74BQ6ZQY2 392 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 ADGRE4PQ86SQ3 457 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 OR5W2Q8NH69 310 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 FBXO27Q8NI29 283 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 POC1BQ8TC44 478 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 OIT3Q8WWZ8 545 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 WNT2BQ93097 391 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 ZG16BQ96DA0 208 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 THUMPD3Q9BV44 507 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 PINK1Q9BXM7 581 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 LAT2Q9GZY6 243 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 SLC38A1Q9H2H9 487 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 RAD21L1Q9H4I0 556 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 RUBCNLQ9H714 662 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 CLCF1Q9UBD9 225 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 SLC35A3Q9Y2D2 325 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 NBPF19A0A087WUL8 3843 aa11.36□□□□□ -0.59
SMARCE1-218ENST00000582955 A0A1W2PP18 115 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 SLC22A20A6NK97 555 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 ANGPT2O15123 496 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 CD1EP15812 388 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 PRKCAP17252 672 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 CTSSP25774 331 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 PSMA4P25789 261 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 MDH1P40925 334 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 EIF1AXP47813 144 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 CRISP3P54108 245 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 CLDN15P56746 228 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 RAC1P63000 192 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 GNA13Q14344 377 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 QPRTQ15274 297 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 RGNQ15493 299 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 LRIF1Q5T3J3 769 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 METTL21CQ5VZV1 264 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 CGB2Q6NT52 195 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 MEX3BQ6ZN04 569 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 GGNQ86UU5 652 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 GCNT2Q8N0V5 402 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 RELL2Q8NC24 303 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 GPR119Q8TDV5 335 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 WDR60Q8WVS4 1066 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 INTS12Q96CB8 462 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 ARSGQ96EG1 525 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF845Q96IR2 970 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 UCN2Q96RP3 112 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF385DQ9H6B1 395 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 CCDC134Q9H6E4 229 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 MTHFD2LQ9H903 347 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 SLC52A3Q9NQ40 469 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 NPDC1Q9NQX5 325 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 THUMPD1Q9NXG2 353 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 SLC25A37Q9NYZ2 338 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 CALML5Q9NZT1 146 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 SLAMF8Q9P0V8 285 aa11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF629Q9UEG4 869 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 LEF1Q9UJU2 399 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 GPC6Q9Y625 555 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-218ENST00000582955 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 AGAP5A6NIR3 686 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 CLDN24A6NM45 220 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 EEF1E1-BLOC1S5C9J1V9 151 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 TNFSF11O14788 317 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 EEF1E1O43324 174 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 RCBTB2O95199 551 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 TGM6O95932 706 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 DBIP07108 87 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 IL7RP16871 459 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms