RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 ZDHHC24Q6UX98 284 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 RAPH1Q70E73 1250 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 OR2L13Q8N349 312 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 C1orf52Q8N6N3 182 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 SPATA4Q8NEY3 305 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 FBF1Q8TES7 1133 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 MRRFQ96E11 262 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 MUS81Q96NY9 551 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 SNX18Q96RF0 628 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 ELOVL6Q9H5J4 265 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 BRF2Q9HAW0 419 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 FAM187AA6NFU0 413 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 TTC36A6NLP5 189 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 B4DSR2 109 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 ATP6V1G2-DDX39BF2Z307 99 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 KIF2AO00139 706 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 CYTIPO60759 359 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 RGS9O75916 674 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 ESRRBO95718 433 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 OXSR1O95747 527 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 CRABP2P29373 138 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 RFX3P48380 749 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 CCNG1P51959 295 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 PLTPP55058 493 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 FOXF1Q12946 379 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 ZNHIT3Q15649 155 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 OCLNQ16625 522 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 C1QTNF12Q5T7M4 302 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 SLC46A3Q7Z3Q1 461 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 GALNT5Q7Z7M9 940 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 GLCCI1Q86VQ1 547 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 MISPQ8IVT2 679 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 CENPLQ8N0S6 344 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 OR4C3Q8NH37 302 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 FBXO25Q8TCJ0 367 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 ZFP90Q8TF47 636 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 MRPL24Q96A35 216 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 ZNF300Q96RE9 604 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 C3orf14Q9HBI5 128 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 MCM8Q9UJA3 840 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 USP22Q9UPT9 525 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 TRAF6Q9Y4K3 522 aa12.09□□□□□ -0.47
CSNK1D-219ENST00000581660 IGHV3-15A0A0B4J1V0 119 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 A0A1W2PR80 420 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 CIB4A0PJX0 185 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 HMX2A2RU54 273 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 MYO1GB0I1T2 1018 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 UPK1AO00322 258 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 ZNF195O14628 629 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 EIF3HO15372 352 aaKnown RBP eCLIP12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 KCNH1O95259 989 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 PGCP20142 388 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 SPRP35270 261 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 ARL1P40616 181 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 MAGEA4P43358 317 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 KHKP50053 298 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 PPOXP50336 477 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 RASGEF1BQ0VAM2 473 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 RIN1Q13671 783 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 SLC29A2Q14542 456 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 MLC1Q15049 377 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 GABRA6Q16445 453 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 TMEM176BQ3YBM2 270 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 GLE1Q53GS7 698 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 SGO1Q5FBB7 561 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 GRTP1Q5TC63 336 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 OR7E24Q6IFN5 339 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 WDR31Q8NA23 367 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 HOXB13Q92826 284 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 ATP6V1E2Q96A05 226 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 VRK1Q99986 396 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 FARSBQ9NSD9 589 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 NMRK1Q9NWW6 199 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 TAS2R16Q9NYV7 291 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 MALT1Q9UDY8 824 aa12.08□□□□□ -0.48
CSNK1D-219ENST00000581660 IGKV3D-15A0A087WSY6 115 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 GXYLT2A0PJZ3 443 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 B9A039 149 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 PDE5AO76074 875 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 PDYNP01213 254 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 IFI6P09912 130 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 EPHA1P21709 976 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 SERPINF1P36955 418 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 MAP3K8P41279 467 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 PRIM2P49643 509 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 IDH3GP51553 393 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 FOXL1Q12952 345 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 HEPACAMQ14CZ8 416 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 EFNB3Q15768 340 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 MROH9Q5TGP6 573 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 SHQ1Q6PI26 577 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 TMEM107Q6UX40 140 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 CYS1Q717R9 158 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 ZNF786Q8N393 782 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 SVOPLQ8N434 492 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 C17orf78Q8N4C9 275 aa12.07□□□□□ -0.48
CSNK1D-219ENST00000581660 GATSQ8NAP1 163 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms