RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 CXorf36Q9H7Y0 433 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 ZNF395Q9H8N7 513 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 FBXO34Q9NWN3 711 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 DTNAQ9Y4J8 743 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 PLCE1Q9P212 2302 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 A0A0J9YW62 118 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 CNOT4O95628 575 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 PLGP00747 810 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 TCEA1P23193 301 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 SLC6A8P48029 635 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 HBA1P69905 142 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 ZNF117Q03924 483 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 ACKR1Q16570 336 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 ZNF239Q16600 458 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 HBMQ6B0K9 141 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 HEPHL1Q6MZM0 1159 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 STAC2Q6ZMT1 411 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 GALNT10Q86SR1 603 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 KRTAP1-3Q8IUG1 177 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 OR5W2Q8NH69 310 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 GPR119Q8TDV5 335 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 ST8SIA1Q92185 356 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 JADE3Q92613 823 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 OSTF1Q92882 214 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 POM121Q96HA1 1249 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 SDF2Q99470 211 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 TMEM204Q9BSN7 226 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 KLHL28Q9NXS3 571 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 RAP2CQ9Y3L5 183 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 SNX8Q9Y5X2 465 aa12.96□□□□□ -0.33
SMARCE1-216ENST00000580419 USF3Q68DE3 2245 aa12.96□□□□□ -0.34
SMARCE1-216ENST00000580419 ZNF195O14628 629 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 ZNF264O43296 627 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 CXCL13O43927 109 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 SPAG7O75391 227 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 C6orf47O95873 294 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 G6PDP11413 515 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 PRKCAP17252 672 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 AGTR1P30556 359 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 MAGEA8P43361 318 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 KCNJ5P48544 419 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 RAC3P60763 192 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 SIRPAP78324 504 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 SELENBP1Q13228 472 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 P2RY6Q15077 328 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 ARHGAP11BQ3KRB8 267 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 CCNJQ5T5M9 372 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 ADAM5Q6NVV9 412 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 ZCCHC23Q6ZST2 131 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 VPS37AQ8NEZ2 397 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 STEAP2Q8NFT2 490 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 PHOSPHO1Q8TCT1 267 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 PMM1Q92871 262 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 REXO5Q96IC2 774 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 C18orf12Q96KH6 178 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 OR7D2Q96RA2 312 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 GSX2Q9BZM3 304 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 ZNF350Q9GZX5 532 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 BCO1Q9HAY6 547 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 KLHL13Q9P2N7 655 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 HIVEP2P31629 2446 aa12.95□□□□□ -0.34
SMARCE1-216ENST00000580419 PRSS51A0A1B0GVH4 220 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 ESPNB1AK53 854 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 TNFSF11O14788 317 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 KLF4O43474 513 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 SCN2BO60939 215 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 STX11O75558 287 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 NKX6-1P78426 367 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 LRRC74AQ0VAA2 488 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 CBFBQ13951 182 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 SPDYE7PQ495Y7 208 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 C1QTNF12Q5T7M4 302 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 ANXA8L1Q5VT79 327 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 OGFOD2Q6N063 350 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 CBLN3Q6UW01 205 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 DNAJC14Q6Y2X3 702 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 GABRG1Q8N1C3 465 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 KRTCAP2Q8N6L1 136 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 FAM71CQ8NEG0 241 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 SLC25A43Q8WUT9 341 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 LAT2Q9GZY6 243 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 SAP130Q9H0E3 1048 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 EXD2Q9NVH0 621 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 C6orf203Q9P0P8 240 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 PCDHGB4Q9UN71 923 aa12.94□□□□□ -0.34
SMARCE1-216ENST00000580419 JMJD1CQ15652 2540 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 SHISA8B8ZZ34 492 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 GTPBP1O00178 669 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 ANKRD28O15084 1053 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 DNPH1O43598 174 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 EFNA2O43921 213 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 SMPD2O60906 423 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 PRKD3O94806 890 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 THBDP07204 575 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 YES1P07947 543 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 UBL4AP11441 157 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 CREB1P16220 341 aa12.93□□□□□ -0.34
SMARCE1-216ENST00000580419 RPL14P50914 215 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms