RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 BTBD9Q96Q07 612 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 LMF2Q9BU23 707 aaKnown RBP17.47■□□□□ 0.39
LIMD2-209ENST00000580222 ACTRT3Q9BYD9 372 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 Q9N2J8 555 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 GPATCH2Q9NW75 528 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 NDRG3Q9UGV2 375 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 PCDHB14Q9Y5E9 798 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 ALOX5P09917 674 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 ACP2P11117 423 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 MATN1P21941 496 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 PTPN6P29350 595 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 NRG3P56975 720 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 CORO7P57737 925 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 RPS26P62854 115 aaKnown RBP17.46■□□□□ 0.39
LIMD2-209ENST00000580222 DMTNQ08495 405 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 TRMT5Q32P41 509 aaKnown RBP17.46■□□□□ 0.39
LIMD2-209ENST00000580222 ZCCHC12Q6PEW1 402 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 NPSR1Q6W5P4 371 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 SLC15A4Q8N697 577 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 FITM2Q8N6M3 262 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 ZPLD1Q8TCW7 415 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 ADAMTS15Q8TE58 950 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 ZFP90Q8TF47 636 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 ABTB1Q969K4 478 aaPredicted RBP17.46■□□□□ 0.39
LIMD2-209ENST00000580222 C16orf58Q96GQ5 468 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 ZNF597Q96LX8 424 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 G6PC3Q9BUM1 346 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 SFXN3Q9BWM7 321 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 SLAMF8Q9P0V8 285 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 GPR55Q9Y2T6 319 aaPredicted RBP17.46■□□□□ 0.39
LIMD2-209ENST00000580222 OR10H1Q9Y4A9 318 aa17.46■□□□□ 0.39
LIMD2-209ENST00000580222 USF3Q68DE3 2245 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 MED12Q93074 2177 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 ACOX3O15254 700 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 PHF1O43189 567 aaPredicted RBP17.45■□□□□ 0.38
LIMD2-209ENST00000580222 RCBTB2O95199 551 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 HOXB9P17482 250 aaPredicted RBP17.45■□□□□ 0.38
LIMD2-209ENST00000580222 DRD5P21918 477 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 KHKP50053 298 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 CASP9P55211 416 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 PSG6Q00889 435 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 PLCXD2Q0VAA5 305 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 SF3B4Q15427 424 aaKnown RBP eCLIP17.45■□□□□ 0.38
LIMD2-209ENST00000580222 NTRK2Q16620 822 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 ADGRE4PQ86SQ3 457 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 RNF130Q86XS8 419 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 PRR22Q8IZ63 422 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 COX18Q8N8Q8 333 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 GPR151Q8TDV0 419 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 DIO2Q92813 273 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 OR51I1Q9H343 314 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 TPT1P8Q9HAU6 139 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 SLC25A37Q9NYZ2 338 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 VAPAQ9P0L0 249 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 TAGLN3Q9UI15 199 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 C15orf41Q9Y2V0 281 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 ROS1P08922 2347 aa17.45■□□□□ 0.38
LIMD2-209ENST00000580222 NINQ8N4C6 2090 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 FREM3P0C091 2139 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 ANKRD33BA6NCL7 494 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 RNF223E7ERA6 249 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 CLIC1O00299 241 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 AIM2O14862 343 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 TNFSF13O75888 250 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 NKX2-2O95096 273 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 C1QCP02747 245 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 CT45A8P0DMV1 189 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 CT45A9P0DMV2 189 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 CRYGSP22914 178 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 PPIBP23284 216 aaKnown RBP17.44■□□□□ 0.38
LIMD2-209ENST00000580222 GABRA3P34903 492 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 KRT20P35900 424 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 CPOXP36551 454 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 ANXA11P50995 505 aaKnown RBP17.44■□□□□ 0.38
LIMD2-209ENST00000580222 FBXW4P57775 412 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 DUSP5Q16690 384 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 CT45A2Q5DJT8 189 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 TNFAIP8L2Q6P589 184 aaPredicted RBP17.44■□□□□ 0.38
LIMD2-209ENST00000580222 DLEU7Q6UYE1 221 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 C20orf204Q6ZNR8 217 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 TRPM8Q7Z2W7 1104 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 YRDCQ86U90 279 aaKnown RBP17.44■□□□□ 0.38
LIMD2-209ENST00000580222 HIPK1Q86Z02 1210 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 MSRB3Q8IXL7 192 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 SLC16A11Q8NCK7 471 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 OR5D16Q8NGK9 328 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 NTNG2Q96CW9 530 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 OR7D2Q96RA2 312 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 CGREF1Q99674 301 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 PIGUQ9H490 435 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 RAD21L1Q9H4I0 556 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 SERHL2Q9H4I8 314 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 ZNF701Q9NV72 531 aaPredicted RBP17.44■□□□□ 0.38
LIMD2-209ENST00000580222 ARL8BQ9NVJ2 186 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 GID8Q9NWU2 228 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 NUP214P35658 2090 aaPredicted RBP17.44■□□□□ 0.38
LIMD2-209ENST00000580222 DOCK7Q96N67 2140 aa17.44■□□□□ 0.38
LIMD2-209ENST00000580222 TRBV5-3A0A0A0MS03 114 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 TO15178 435 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms