RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 CDH2P19022 906 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 PEX2P28328 305 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 MSX1P28360 303 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 HMGA2P52926 109 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 CDH12P55289 794 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 FBXW4P57775 412 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 KCNAB2Q13303 367 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 TRAM2Q15035 370 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 LRRC36Q1X8D7 754 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 DCST1Q5T197 706 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 SLC30A6Q6NXT4 461 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 TMEM81Q6P7N7 255 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF613Q6PF04 617 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 C16orf47Q6ZP98 133 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 RTL4Q6ZR62 310 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 STK32CQ86UX6 486 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 OFCC1Q8IZS5 231 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 BEST3Q8N1M1 668 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 TMCO5AQ8N6Q1 288 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 POGLUT1Q8NBL1 392 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 SLC38A4Q969I6 547 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 CIB1Q99828 191 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 RBM4BQ9BQ04 359 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 RBM4Q9BWF3 364 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 RLIMQ9NVW2 624 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 DNAJB12Q9NXW2 375 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 KIF17Q9P2E2 1029 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 ACAD8Q9UKU7 415 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 OAZ3Q9UMX2 235 aa12.75□□□□□ -0.37
CSNK1D-209ENST00000578904 EML6Q6ZMW3 1958 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 CPAMD8Q8IZJ3 1885 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 A0A1W2PRQ8 180 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 FAM47E-STBD1D6RA91 191 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 FAAHO00519 579 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 FADS1O60427 444 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 DIRAS1O95057 198 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 ANGPTL1O95841 491 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 ANXA8P13928 327 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 PGCP20142 388 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 SOX3P41225 446 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 YAP1P46937 504 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 CYB561P49447 251 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 SUMO3P55854 103 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 EPS8Q12929 822 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 MFAP5Q13361 173 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 CBFBQ13951 182 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 DGCR6Q14129 220 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 RFX4Q33E94 735 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF791Q3KP31 576 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 LINC00303Q3SY05 128 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 IQCCQ4KMZ1 466 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 FGD3Q5JSP0 725 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 ENTPD8Q5MY95 495 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 SLC22A10Q63ZE4 541 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 LPCAT4Q643R3 524 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 PPP4R4Q6NUP7 873 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 IL20RBQ6UXL0 311 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 FAM71CQ8NEG0 241 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 OR5M3Q8NGP4 307 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 GIPC3Q8TF64 312 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 DNAJA4Q8WW22 397 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 DNAJC9Q8WXX5 260 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 CNOT9Q92600 299 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 HGDQ93099 445 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 ALPK1Q96QP1 1244 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 SMAD5Q99717 465 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF556Q9HAH1 456 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 NMNAT1Q9HAN9 279 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 STMN3Q9NZ72 180 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 ENOPH1Q9UHY7 261 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 LYVE1Q9Y5Y7 322 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 U3KQV3 271 aa12.74□□□□□ -0.37
CSNK1D-209ENST00000578904 CENPVL1A0A0U1RR11 272 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ARRDC5A6NEK1 342 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 CLDN24A6NM45 220 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 CPSF4LA6NMK7 179 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ERVH48-1M5A8F1 160 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 HCRTR2O43614 444 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 SCO2O43819 266 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 CCNB2O95067 398 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 RASAL1O95294 804 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 EPPINO95925 133 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 HPRP00739 348 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 P04436 131 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ST13P50502 369 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 HLCSP50747 726 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 P2RX1P51575 399 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 CCR4P51679 360 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 RAD23AP54725 363 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ARG2P78540 354 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 PIN1Q13526 163 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 GANABQ14697 944 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 OR1Q1Q15612 314 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 MICAQ29983 383 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 OTUD3Q5T2D3 398 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 SWT1Q5T5J6 900 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 FNDC7Q5VTL7 733 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 WBP2NLQ6ICG8 309 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 LYPD8Q6UX82 237 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF605Q86T29 641 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms