RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-208	ENST00000578630	ARPIN	Q7Z6K5	226 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	CD163	Q86VB7	1156 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	TREML1	Q86YW5	311 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	ZNF440	Q8IYI8	595 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	HIPK4	Q8NE63	616 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	NFKBID	Q8NI38	313 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	BCAS4	Q8TDM0	211 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	GPR119	Q8TDV5	335 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	ARSG	Q96EG1	525 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	VKORC1	Q9BQB6	163 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	UGT2B28	Q9BY64	529 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	QRSL1	Q9H0R6	528 aa	Known RBP	10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	IKZF5	Q9H5V7	419 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	RUBCNL	Q9H714	662 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	PNPLA3	Q9NST1	481 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	MED17	Q9NVC6	651 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	TNFRSF10D	Q9UBN6	386 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	TINAG	Q9UJW2	476 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	CAMK2A	Q9UQM7	478 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	ANGPT4	Q9Y264	503 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	VDAC3	Q9Y277	283 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	MEMO1	Q9Y316	297 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	HRH3	Q9Y5N1	445 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	GPC6	Q9Y625	555 aa	Predicted RBP	10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	FREM3	P0C091	2139 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	MYO7B	Q6PIF6	2116 aa		10.45	□□□□□ -0.74
ERBB2-208	ENST00000578630	OR2M5	A3KFT3	312 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	PRORSD1P	A6NEY8	169 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	LINGO3	P0C6S8	592 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	UQCRB	P14927	111 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	ZNF17	P17021	662 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	POU3F2	P20265	443 aa	Predicted RBP	10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	RPS4Y1	P22090	263 aa	Known RBP	10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	ACVR2A	P27037	513 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	RNF144A	P50876	292 aa	Predicted RBP	10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	MNAT1	P51948	309 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	SMS	P52788	366 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	GFRA1	P56159	465 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	CRYZ	Q08257	329 aa	Known RBP	10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	SELPLG	Q14242	412 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	ADRM1	Q16186	407 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	ERICH5	Q6P6B1	374 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	HACD2	Q6Y1H2	254 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	ZNF550	Q7Z398	422 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	MEIOB	Q8N635	442 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	ZNF563	Q8TA94	476 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	WDYHV1	Q96HA8	205 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	SLC39A3	Q9BRY0	314 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	EXOSC3	Q9NQT5	275 aa	Known RBP	10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	SLC13A4	Q9UKG4	626 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	ZNF337	Q9Y3M9	751 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	AP4B1	Q9Y6B7	739 aa		10.44	□□□□□ -0.74
ERBB2-208	ENST00000578630	DSPP	Q9NZW4	1301 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	CENPVL1	A0A0U1RR11	272 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	C7orf72	A4D263	438 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630		B4DXG7	233 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630		H3BML4	177 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	SEMA7A	O75326	666 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	PABPC4L	P0CB38	370 aa	Known RBP	10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	ME2	P23368	584 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	RYK	P34925	604 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	STAR	P49675	285 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	NUDT2	P50583	147 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	B3GALT5-AS1	P59052	145 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	RPS3A	P61247	264 aa	Known RBP	10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	COPZ1	P61923	177 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	RAC1	P63000	192 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	SRY	Q05066	204 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	SKP2	Q13309	424 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	QPRT	Q15274	297 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	VMAC	Q2NL98	169 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	PLPPR5	Q32ZL2	321 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	NDUFAF6	Q330K2	333 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	EMC4	Q5J8M3	183 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	PDSS1	Q5T2R2	415 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	MRPL2	Q5T653	305 aa	Known RBP	10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	B3GNT6	Q6ZMB0	384 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	NET1	Q7Z628	596 aa	Predicted RBP	10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	HMGN2P46	Q86SG4	172 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	PATL1	Q86TB9	770 aa	Known RBP	10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	VRK2	Q86Y07	508 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	GRAMD2A	Q8IUY3	354 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	C10orf111	Q8N326	155 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	OR5M1	Q8NGP8	315 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	ZPLD1	Q8TCW7	415 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	SLC26A7	Q8TE54	656 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	ST8SIA1	Q92185	356 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	MRGPRX4	Q96LA9	322 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	TRIM8	Q9BZR9	551 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	PRDM14	Q9GZV8	571 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	PIF1	Q9H611	641 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	SERINC1	Q9NRX5	453 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	KLHL28	Q9NXS3	571 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	TAGLN3	Q9UI15	199 aa		10.43	□□□□□ -0.74
ERBB2-208	ENST00000578630	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms