RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 A0A1W2PRQ8 180 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 CDC14CA4D256 554 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 CLEC3AO75596 197 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 SNRPGP62308 76 aaKnown RBP12.71□□□□□ -0.37
NDEL1-204ENST00000578172 PLK5Q496M5 336 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 FAAP20Q6NZ36 180 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 PARM1Q6UWI2 310 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 OOSP2Q86WS3 158 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 TOX2Q96NM4 488 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 SIGLEC11Q96RL6 698 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 APOOQ9BUR5 198 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 ACTRT3Q9BYD9 372 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 BTBD1Q9H0C5 482 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 SOHLH2Q9NX45 425 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 ADAM18Q9Y3Q7 739 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 TRIOBPQ9H2D6 2365 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 A0A0G2JPF8 293 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 ACOD1A6NK06 481 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 CENPBD1B2RD01 187 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 HNRNPCL3B7ZW38 293 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 EPPINO95925 133 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 MT-ND4P03905 459 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 HNRNPCL4P0DMR1 293 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 DRD2P14416 443 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 ITPKBP27987 946 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 BMP8BP34820 402 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 HMGA2P52926 109 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 OC90Q02509 493 aaPredicted RBP12.71□□□□□ -0.37
NDEL1-204ENST00000578172 SMUG1Q53HV7 270 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 BMP8AQ7Z5Y6 402 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 PRR22Q8IZ63 422 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 OR1E3Q8WZA6 343 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 SLC7A6Q92536 515 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 AKAP1Q92667 903 aaKnown RBP eCLIP12.71□□□□□ -0.37
NDEL1-204ENST00000578172 METTL2AQ96IZ6 378 aaKnown RBP12.71□□□□□ -0.37
NDEL1-204ENST00000578172 HHIPQ96QV1 700 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 PELI2Q9HAT8 420 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 SLC25A19Q9HC21 320 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 B3GAT2Q9NPZ5 323 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 ADAM30Q9UKF2 790 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 PPIEQ9UNP9 301 aaKnown RBP12.71□□□□□ -0.37
NDEL1-204ENST00000578172 UNC119BA6NIH7 251 aa12.71□□□□□ -0.38
NDEL1-204ENST00000578172 TNFRSF10AO00220 468 aa12.71□□□□□ -0.38
NDEL1-204ENST00000578172 HOXC11O43248 304 aaPredicted RBP12.71□□□□□ -0.38
NDEL1-204ENST00000578172 APEHP13798 732 aaKnown RBP12.71□□□□□ -0.38
NDEL1-204ENST00000578172 AGBL4Q5VU57 503 aa12.71□□□□□ -0.38
NDEL1-204ENST00000578172 SLC44A3Q8N4M1 653 aa12.71□□□□□ -0.38
NDEL1-204ENST00000578172 TMIEQ8NEW7 156 aa12.71□□□□□ -0.38
NDEL1-204ENST00000578172 OR4M1Q8NGD0 313 aa12.71□□□□□ -0.38
NDEL1-204ENST00000578172 OR5M3Q8NGP4 307 aa12.71□□□□□ -0.38
NDEL1-204ENST00000578172 OR9A4Q8NGU2 314 aa12.71□□□□□ -0.38
NDEL1-204ENST00000578172 CNOT9Q92600 299 aaKnown RBP12.71□□□□□ -0.38
NDEL1-204ENST00000578172 ZNF443Q9Y2A4 671 aaPredicted RBP12.71□□□□□ -0.38
NDEL1-204ENST00000578172 RP1L1Q8IWN7 2480 aaPredicted RBP12.71□□□□□ -0.38
NDEL1-204ENST00000578172 P2RX6O15547 441 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 EDNRAP25101 427 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 TSPAN31Q12999 210 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 MAB21L1Q13394 359 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 OR1Q1Q15612 314 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 SLC25A35Q3KQZ1 300 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 C12orf73Q69YU5 71 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 SLC48A1Q6P1K1 146 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 THSD4Q6ZMP0 1018 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 TRMT10AQ8TBZ6 339 aaKnown RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 ACOT11Q8WXI4 607 aaPredicted RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 FGF14Q92915 247 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 RBM18Q96H35 190 aaKnown RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 TSSK2Q96PF2 358 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 OR2M4Q96R27 311 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 PRDM7Q9NQW5 492 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 TAS2R7Q9NYW3 318 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 EXOSC1Q9Y3B2 195 aaKnown RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 MED31Q9Y3C7 131 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 A0A0A6YYC8 382 aaPredicted RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 IDSB3KWA1 339 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 I3L1I5 382 aaPredicted RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 STK25O00506 426 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 LINC01565O15544 149 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 MRPS14O60783 128 aaKnown RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 F3P13726 295 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 XKRXQ6PP77 449 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 ZNF836Q6ZNA1 936 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 ZAR1Q86SH2 424 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 SRFBP1Q8NEF9 429 aaKnown RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 TMEM239Q8WW34 195 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 ST6GAL2Q96JF0 529 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 TAPBPLQ9BX59 468 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 LMAN2LQ9H0V9 348 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 SIRT4Q9Y6E7 314 aaPredicted RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 LANCL1O43813 399 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 GATBO75879 557 aaKnown RBP12.7□□□□□ -0.38
NDEL1-204ENST00000578172 CEACAM5P06731 702 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 MAKP20794 623 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 GIFP27352 417 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 ADH7P40394 386 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 RAB40BQ12829 278 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 POU4F3Q15319 338 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 NTRK2Q16620 822 aa12.7□□□□□ -0.38
NDEL1-204ENST00000578172 METAP1DQ6UB28 335 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms