RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 OLIG3Q7RTU3 272 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 PIWIL3Q7Z3Z3 882 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 VRK2Q86Y07 508 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ZNF440Q8IYI8 595 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 PSD4Q8NDX1 1056 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 WDR60Q8WVS4 1066 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 LZICQ8WZA0 190 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ARSGQ96EG1 525 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 TMEM41AQ96HV5 264 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 C7orf34Q96L11 122 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 SIGLEC12Q96PQ1 595 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ARHGDIGQ99819 225 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 TRIM15Q9C019 465 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 LAT2Q9GZY6 243 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 QRSL1Q9H0R6 528 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 TIMMDC1Q9NPL8 285 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 SDHAF3Q9NRP4 125 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 SACM1LQ9NTJ5 587 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 FLRT3Q9NZU0 649 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 SLC5A6Q9Y289 635 aa10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ZNF443Q9Y2A4 671 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 MRPS18CQ9Y3D5 142 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-204ENST00000577664 PRAMEF25A6NGN4 478 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ETV2O00321 342 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ZNF264O43296 627 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 NDUFB5O43674 189 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 NME2P1O60361 137 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 DPM1O60762 260 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 FMO6PO60774 539 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 CIB2O75838 187 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 STAMBPO95630 424 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ANGPTL1O95841 491 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 GPIP06744 558 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 CCL3P10147 92 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 HPGDP15428 266 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 NME2P22392 152 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 AQP1P29972 269 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ACAA2P42765 397 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 MAGEA2P43356 314 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 MRPL49Q13405 166 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 CCNIQ14094 377 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 OR1C1Q15619 314 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 EIPR1Q53HC9 387 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 MRPL2Q5T653 305 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 C1orf146Q5VVC0 180 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 SPINK14Q6IE38 97 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 SLC25A25Q6KCM7 469 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ZNF836Q6ZNA1 936 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 LINC00696Q6ZRV3 163 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 Q6ZS92 163 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ASB18Q6ZVZ8 466 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ZNF771Q7L3S4 317 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 GALNT10Q86SR1 603 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 CLIP4Q8N3C7 705 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 LSMEM1Q8N8F7 131 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 FADS6Q8N9I5 356 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 SLC26A7Q8TE54 656 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 FAM162AQ96A26 154 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 CCDC124Q96CT7 223 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 C5orf34Q96MH7 638 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 UGT2B28Q9BY64 529 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 TBL1XR1Q9BZK7 514 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 POLR2J2Q9GZM3 115 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 POLR2J3Q9H1A7 115 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 DENND2DQ9H6A0 471 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 IL1RAPQ9NPH3 570 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 CCM2LQ9NUG4 571 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ARMC1Q9NVT9 282 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 DNAJB12Q9NXW2 375 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 ICAM5Q9UMF0 924 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 WIF1Q9Y5W5 379 aa10.15□□□□□ -0.78
CDK5RAP3-204ENST00000577664 NPIPA5A0A0B4J1W7 369 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 TRAV17A0A0B4J275 112 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 NPIPA7E9PJI5 369 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 SLC25A12O75746 678 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 PRKD3O94806 890 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 CSTAP01040 98 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 P04436 131 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 NPIPA8P0DM63 369 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 RFX3P48380 749 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 P2RX1P51575 399 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 ZNF136P52737 540 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 SUMO3P55854 103 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 FOXO1Q12778 655 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 SKP2Q13309 424 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 CD226Q15762 336 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 GLIPR1L2Q4G1C9 344 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 LRRC23Q53EV4 343 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 TIGD3Q6B0B8 471 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 CYP2R1Q6VVX0 501 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 ZNF550Q7Z398 422 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 TSEN54Q7Z6J9 526 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 MARCH3Q86UD3 253 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 COMTD1Q86VU5 262 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 ADGRG5Q8IZF4 528 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 ZADH2Q8N4Q0 377 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 WDSUB1Q8N9V3 476 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 SMYD1Q8NB12 490 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 PRR7Q8TB68 274 aa10.14□□□□□ -0.79
CDK5RAP3-204ENST00000577664 DUSP19Q8WTR2 217 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms