RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 AGPAT2O15120 278 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 F11P03951 625 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 SFTPBP07988 381 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 FUT1P19526 365 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 RBM34P42696 430 aaKnown RBP16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 HCCSP53701 268 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 KIAA1024LP59773 190 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 DECR1Q16698 335 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 ZNF776Q68DI1 518 aaPredicted RBP16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 OR52E1Q8NGJ3 308 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 ZNF566Q969W8 418 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC25A46Q96AG3 418 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 SPNS1Q9H2V7 528 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 CWH43Q9H720 699 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 HHATLQ9HCP6 504 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 CA5BQ9Y2D0 317 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 A0A1B0GVI7 797 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 ALX3O95076 343 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 VNN2O95498 520 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC6A12P48065 614 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 VEGFCP49767 419 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 LCTLQ6UWM7 567 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 ORAI1Q96D31 301 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 PDCD1LG2Q9BQ51 273 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 NOX3Q9HBY0 568 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 HS3ST2Q9Y278 367 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 A3GALT2U3KPV4 340 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 SLCO2B1O94956 709 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 PDGFAP04085 211 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 RLN2P04090 185 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 TCRBP04435 133 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 DDOSTP39656 456 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 FABP5Q01469 135 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 TMEM31Q5JXX7 168 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 CNOT9Q92600 299 aaKnown RBP16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 TNFRSF13CQ96RJ3 184 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 FBXL2Q9UKC9 423 aa16.73■□□□□ 0.27
ATPAF1-214ENST00000576409 HOXC11O43248 304 aaPredicted RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 FARS2O95363 451 aaKnown RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ZNF20P17024 532 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ELK1P19419 428 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 MAPK3P27361 379 aaPredicted RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 B4GALNT1Q00973 533 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ARHGAP11AQ6P4F7 1023 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 MEPCEQ7L2J0 689 aaKnown RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 STX12Q86Y82 276 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC39A11Q8N1S5 342 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ZNF527Q8NB42 609 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 GCDHQ92947 438 aaPredicted RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 FBXO9Q9UK97 447 aaPredicted RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 NUBP2Q9Y5Y2 271 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ZAR1LA6NP61 321 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 SYPP08247 313 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 TEAD1P28347 426 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 KIR2DL3P43628 341 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 PRDX1Q06830 199 aaKnown RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 AIMP2Q13155 320 aaKnown RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ERV3-1Q14264 604 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 MPP7Q5T2T1 576 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 MRPL2Q5T653 305 aaKnown RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 SFXN4Q6P4A7 337 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 LINC00299Q6ZSB3 139 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 CSNK1A1LQ8N752 337 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 BBS1Q8NFJ9 593 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 IL17RDQ8NFM7 739 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 SYNPRQ8TBG9 265 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 NEURL3Q96EH8 262 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 SPATA6Q9NWH7 488 aaPredicted RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 GLTPQ9NZD2 209 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 COPZ2Q9P299 210 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 GFYI3L273 518 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 FCMRO60667 390 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ITGA5P08648 1049 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 CD22P20273 847 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ITGB8P26012 769 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 HLA-DMAP28067 261 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 GBX1Q14549 363 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 C3orf38Q5JPI3 329 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ALKBH2Q6NS38 261 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 BCL7CQ8WUZ0 217 aaPredicted RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 METTL2AQ96IZ6 378 aaKnown RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 ZMAT3Q9HA38 289 aaKnown RBP16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 AP1M2Q9Y6Q5 423 aa16.72■□□□□ 0.27
ATPAF1-214ENST00000576409 CDC40O60508 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 OR8G3PP0DMU2 310 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 CFL1P23528 166 aaKnown RBP16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 GDNFP39905 211 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 GPR176Q14439 515 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 CST6Q15828 149 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 C1orf94Q6P1W5 598 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 FIGLAQ6QHK4 219 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 DPPA4Q7L190 304 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 GPAT4Q86UL3 456 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 PRR22Q8IZ63 422 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 NR4A3Q92570 626 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 FAM46BQ96A09 425 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 OR14A2Q96R54 314 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 SEC22CQ9BRL7 303 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 C1QTNF2Q9BXJ5 285 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 FN3KQ9H479 309 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms