RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 ZNF662Q6ZS27 426 aa12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 SPATA21Q7Z572 469 aa12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 UHMK1Q8TAS1 419 aaKnown RBP12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 DUSP19Q8WTR2 217 aa12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 CPNE4Q96A23 557 aaPredicted RBP12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 RNF145Q96MT1 663 aa12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 FAM167BQ9BTA0 163 aa12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 FAM120CQ9NX05 1096 aaKnown RBP12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 CFL2Q9Y281 166 aa12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 VWA7Q9Y334 891 aa12.39□□□□□ -0.43
SLC12A4-216ENST00000576377 IGHV1-18A0A0C4DH31 117 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 SRRM5B3KS81 715 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 PGRMC2O15173 223 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 FADS1O60427 444 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 RP2O75695 350 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 IGHV2-5P01817 119 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 ITGA5P08648 1049 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 IGHV4-38-2P0DP08 117 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 PGAM1P18669 254 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 ATP4BP51164 291 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 TMEM33P57088 247 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 MVKQ03426 396 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 ZNF460Q14592 562 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 PDSS1Q5T2R2 415 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 OR4C11Q6IEV9 310 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 NPSR1Q6W5P4 371 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 CNTN4Q8IWV2 1026 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 ZNF100Q8IYN0 542 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 GTPBP8Q8N3Z3 284 aaPredicted RBP12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 OR52R1Q8NGF1 315 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 CKAP2Q8WWK9 683 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 ZNF75CPQ92670 426 aaPredicted RBP12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 RDH5Q92781 318 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 RAB39BQ96DA2 213 aa12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 DENND2DQ9H6A0 471 aaPredicted RBP12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 GPR55Q9Y2T6 319 aaPredicted RBP12.38□□□□□ -0.43
SLC12A4-216ENST00000576377 PLECQ15149 4684 aaKnown RBP12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 TMPRSS11DO60235 418 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 WDR47O94967 919 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 TGFB1P01137 390 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 TCN1P20061 433 aaPredicted RBP12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 THBS4P35443 961 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 RFX3P48380 749 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 EMDP50402 254 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 PDAP1Q13442 181 aaKnown RBP12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 SLC9B1Q4ZJI4 515 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 C9orf135Q5VTT2 229 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 FBXW9Q5XUX1 488 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 ZNF771Q7L3S4 317 aaPredicted RBP12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 PPIL6Q8IXY8 311 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 UBE2J2Q8N2K1 259 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 ANKRD49Q8WVL7 239 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 PDLIM5Q96HC4 596 aaKnown RBP12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 LRRC1Q9BTT6 524 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 TOR3AQ9H497 397 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 SLC17A5Q9NRA2 495 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 MAT2BQ9NZL9 334 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 ASB4Q9Y574 426 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 PSAT1Q9Y617 370 aa12.37□□□□□ -0.43
SLC12A4-216ENST00000576377 RGS14O43566 566 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 XPNPEP2O43895 674 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 NCR1O76036 304 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 CT45A8P0DMV1 189 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 CT45A9P0DMV2 189 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 IVDP26440 423 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 TIA1P31483 386 aaKnown RBP eCLIP12.36□□□□□ -0.433e-8■■□□□ 11.6
SLC12A4-216ENST00000576377 MANFP55145 182 aaKnown RBP12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 PRICKLE4Q2TBC4 344 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 NRN1LQ496H8 165 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 TMEM35AQ53FP2 167 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 CT45A2Q5DJT8 189 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 FBXO48Q5FWF7 155 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 SPANXN3Q5MJ09 141 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 GALNT18Q6P9A2 607 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 MARCH3Q86UD3 253 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 RNF175Q8N4F7 328 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 OR4N2Q8NGD1 307 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 ZNF473Q8WTR7 871 aaKnown RBP12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 ESAMQ96AP7 390 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 CERS2Q96G23 380 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 TRIM54Q9BYV2 358 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 PITHD1Q9GZP4 211 aaPredicted RBP12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 OR51B5Q9H339 312 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 MMP26Q9NRE1 261 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 KLHL9Q9P2J3 617 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 ZNF639Q9UID6 485 aa12.36□□□□□ -0.43
SLC12A4-216ENST00000576377 UBR4Q5T4S7 5183 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 NPEPPSL1A6NEC2 478 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 PIP5K1BO14986 540 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 TAPBPO15533 448 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 CPMP14384 443 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 NPR2P20594 1047 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 PIK3R1P27986 724 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 CALCRP30988 508 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 KRT20P35900 424 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 PNLIPRP2P54317 469 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 OR52E8Q6IFG1 317 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 OR7E24Q6IFN5 339 aa12.35□□□□□ -0.43
SLC12A4-216ENST00000576377 MRM1Q6IN84 353 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms