RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ARSGQ96EG1 525 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 LRRC46Q96FV0 321 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 PAIP1Q9H074 479 aaKnown RBP21.18■□□□□ 0.98
SNF8-217ENST00000576353 RAD21L1Q9H4I0 556 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 MTHFD2LQ9H903 347 aaPredicted RBP21.18■□□□□ 0.98
SNF8-217ENST00000576353 SLC35A3Q9Y2D2 325 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 PCDHB14Q9Y5E9 798 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 SLC22A20A6NK97 555 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 SNRPB2P08579 225 aaKnown RBP21.17■□□□□ 0.98
SNF8-217ENST00000576353 TROVE2P10155 538 aaKnown RBP eCLIP21.17■□□□□ 0.98
SNF8-217ENST00000576353 CCR4P51679 360 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 MVDP53602 400 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 EEF1A1P68104 462 aaKnown RBP21.17■□□□□ 0.98
SNF8-217ENST00000576353 FGFBP1Q14512 234 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 MAPK14Q16539 360 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 GTDC1Q4AE62 458 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 EEF1A1P5Q5VTE0 462 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 METTL21CQ5VZV1 264 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 METTL25Q8N6Q8 603 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 ACBD4Q8NC06 268 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 POC1BQ8TC44 478 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 KLHDC3Q9BQ90 382 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 NPDC1Q9NQX5 325 aaPredicted RBP21.17■□□□□ 0.98
SNF8-217ENST00000576353 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.17■□□□□ 0.98
SNF8-217ENST00000576353 PAQR5Q9NXK6 330 aaPredicted RBP21.17■□□□□ 0.98
SNF8-217ENST00000576353 P2RX2Q9UBL9 471 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 L3MBTL1Q9Y468 752 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 ZNF175Q9Y473 711 aa21.17■□□□□ 0.98
SNF8-217ENST00000576353 CENPVL1A0A0U1RR11 272 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 H0YC42 278 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 CYP7B1O75881 506 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 TPD52P55327 224 aaPredicted RBP21.16■□□□□ 0.98
SNF8-217ENST00000576353 SKP2Q13309 424 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 SGCBQ16585 318 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 OR2A2Q6IF42 318 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 POMZP3Q6PJE2 187 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 MEX3BQ6ZN04 569 aaKnown RBP21.16■□□□□ 0.98
SNF8-217ENST00000576353 ZG16BQ96DA0 208 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 AURKBQ96GD4 344 aaPredicted RBP21.16■□□□□ 0.98
SNF8-217ENST00000576353 MRGPRX4Q96LA9 322 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 NPAS1Q99742 590 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 SFXN3Q9BWM7 321 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 PINK1Q9BXM7 581 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 SLC38A1Q9H2H9 487 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 SLC52A3Q9NQ40 469 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 CALML5Q9NZT1 146 aa21.16■□□□□ 0.98
SNF8-217ENST00000576353 CACNA1CQ13936 2221 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 A0A1W2PP18 115 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 TMEM247A6NEH6 219 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 CLIC1O00299 241 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 EIF1AYO14602 144 aaKnown RBP21.15■□□□□ 0.98
SNF8-217ENST00000576353 TGM6O95932 706 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 CHRM4P08173 479 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 VIMP08670 466 aaKnown RBP21.15■□□□□ 0.98
SNF8-217ENST00000576353 UBTFL6P0CB48 400 aaPredicted RBP21.15■□□□□ 0.98
SNF8-217ENST00000576353 ETFAP13804 333 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 ELK4P28324 431 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 DSTNP60981 165 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 KCNJ10P78508 379 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 FOXF1Q12946 379 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 GNA13Q14344 377 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 PDSS1Q5T2R2 415 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 LRIF1Q5T3J3 769 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 GGNQ86UU5 652 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 MCEMP1Q8IX19 187 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 CMIPQ8IY22 773 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 RELL2Q8NC24 303 aaPredicted RBP21.15■□□□□ 0.98
SNF8-217ENST00000576353 FBXO27Q8NI29 283 aa21.15■□□□□ 0.98
SNF8-217ENST00000576353 INTS12Q96CB8 462 aaKnown RBP21.15■□□□□ 0.98
SNF8-217ENST00000576353 TREX2Q9BQ50 279 aaPredicted RBP21.15■□□□□ 0.98
SNF8-217ENST00000576353 THUMPD3Q9BV44 507 aaKnown RBP21.15■□□□□ 0.98
SNF8-217ENST00000576353 AGAP5A6NIR3 686 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 GJE1A6NN92 205 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 ADAMDEC1O15204 470 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 DNAJA2O60884 412 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 CRHP06850 196 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 PRKCAP17252 672 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 IGFBP2P18065 325 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 PGCP20142 388 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 CAPN3P20807 821 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 PGM1P36871 562 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 ASCL1P50553 236 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 GUCY1A3Q02108 690 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 FOXF2Q12947 444 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 QPRTQ15274 297 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 RGNQ15493 299 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 TOMM34Q15785 309 aaPredicted RBP21.14■□□□□ 0.97
SNF8-217ENST00000576353 SLC25A53Q5H9E4 307 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 PLXDC2Q6UX71 529 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 ESPNLQ6ZVH7 1005 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 LILRA2Q8N149 483 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 TMEM120AQ9BXJ8 343 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 CCDC134Q9H6E4 229 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 SLC24A3Q9HC58 644 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 FGFR1OP2Q9NVK5 253 aa21.14■□□□□ 0.97
SNF8-217ENST00000576353 CENPEQ02224 2701 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 SYT5O00445 386 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 TFPTP0C1Z6 253 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 FCGR2AP12318 317 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms