RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 ORAI3Q9BRQ5 295 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 OR8D2Q9GZM6 311 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SERHL2Q9H4I8 314 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 TNFRSF10DQ9UBN6 386 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 CDH10Q9Y6N8 788 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SNRNP200O75643 2136 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 LRIT2A6NDA9 550 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 DDX6P26196 483 aaKnown RBP eCLIP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 ACADLP28330 430 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 BSGP35613 385 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 PSMB10P40306 273 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 RPA4Q13156 261 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 METTL2BQ6P1Q9 378 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 TMPRSS9Q7Z410 1059 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 ZNF655Q8N720 491 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 OR4K14Q8NGD5 310 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 OR2A1Q8NGT9 310 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 C9orf43Q8TAL5 461 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 ZMYND19Q96E35 227 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 SPATA9Q9BWV2 254 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 C1QTNF7Q9BXJ2 289 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 FN3KQ9H479 309 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 ZNF224Q9NZL3 707 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 APOBEC3BQ9UH17 382 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 IKZF2Q9UKS7 526 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 MKL2Q9ULH7 1088 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 A0A087WUU8 490 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 CCDC85CA6NKD9 419 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 RGS11O94810 467 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 EPPINO95925 133 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 PROS1P07225 676 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 CELA2BP08218 269 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 FBXO45P0C2W1 286 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 GLULP15104 373 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 POU3F2P20265 443 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 DRD5P21918 477 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 ATP5A1P25705 553 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 BTCP35070 178 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 DRD3P35462 400 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 MAGEB1P43366 347 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 MTNR1AP48039 350 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 HMGA2P52926 109 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 PER3P56645 1201 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 SMIM11AP58511 58 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 SNRPNP63162 240 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 RPS21P63220 83 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 MLLT11Q13015 90 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 UBXN2BQ14CS0 331 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 ENTPD8Q5MY95 495 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 PRPF38BQ5VTL8 546 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 C1orf189Q5VU69 101 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 TEX261Q6UWH6 196 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 KIAA0907Q7Z7F0 614 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 PROKR2Q8NFJ6 384 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 ANGPTL6Q8NI99 470 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 OTUB2Q96DC9 234 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 LRIG1Q96JA1 1093 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 HHIPL1Q96JK4 782 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 CHIAQ9BZP6 476 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 BTBD1Q9H0C5 482 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 SRA1Q9HD15 236 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 C12orf4Q9NQ89 552 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 THSD1Q9NS62 852 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 SEMA4GQ9NTN9 838 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 HCN2Q9UL51 889 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 MRPS2Q9Y399 296 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 PIAS3Q9Y6X2 628 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 U3KQ87 197 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 UGDHO60701 494 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 FGF19O95750 216 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 EGFP01133 1207 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 CD3GP09693 182 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 HLA-DMAP28067 261 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 IFNGR2P38484 337 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 CLDN20P56880 219 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 FZD5Q13467 585 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 AGERQ15109 404 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 METRNLQ641Q3 311 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 FIGLAQ6QHK4 219 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 Q6ZSR6 202 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 CHMP1BQ7LBR1 199 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 KANSL1Q7Z3B3 1105 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 FGD2Q7Z6J4 655 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 ASPGQ86U10 573 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 GDPD1Q8N9F7 314 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 OR2L3Q8NG85 312 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 OR8J1Q8NGP2 316 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 PFN4Q8NHR9 129 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 TMEM43Q9BTV4 400 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 NRSN2Q9GZP1 204 aa7.94□□□□□ -1.14
RPAIN-215ENST00000575112 TESQ9UGI8 421 aaKnown RBP7.94□□□□□ -1.14
RPAIN-215ENST00000575112 CENPVL1A0A0U1RR11 272 aa7.93□□□□□ -1.14
RPAIN-215ENST00000575112 SH3D21A4FU49 640 aa7.93□□□□□ -1.14
RPAIN-215ENST00000575112 SNTNA6NMZ2 147 aa7.93□□□□□ -1.14
RPAIN-215ENST00000575112 C11orf98E9PRG8 122 aa7.93□□□□□ -1.14
RPAIN-215ENST00000575112 EEF1E1O43324 174 aaKnown RBP7.93□□□□□ -1.14
RPAIN-215ENST00000575112 SLC22A5O76082 557 aa7.93□□□□□ -1.14
RPAIN-215ENST00000575112 OR7A10O76100 309 aa7.93□□□□□ -1.14
RPAIN-215ENST00000575112 EIF4EP06730 217 aaKnown RBP7.93□□□□□ -1.14
RPAIN-215ENST00000575112 CPEP16870 476 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms