RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 WDR60Q8WVS4 1066 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 MAL2Q969L2 176 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 C1GALT1C1Q96EU7 318 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 SH3YL1Q96HL8 342 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-213ENST00000573577 HOPXQ9BPY8 73 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-213ENST00000573577 ECSITQ9BQ95 431 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 RUBCNLQ9H714 662 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 KAT8Q9H7Z6 458 aaKnown RBP12.28□□□□□ -0.44
RPAIN-213ENST00000573577 KCNE5Q9UJ90 142 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 ZNF232Q9UNY5 417 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 ANGPT4Q9Y264 503 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 IFT52Q9Y366 437 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 ZNF407Q9C0G0 2248 aa12.27□□□□□ -0.44
RPAIN-213ENST00000573577 FXYD1O00168 92 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 NUDT14O95848 222 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ACTL6AO96019 429 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ETS2P15036 469 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 HK1P19367 917 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 RPS4Y1P22090 263 aaKnown RBP12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ACVR2AP27037 513 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 KCNJ10P78508 379 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ZNF117Q03924 483 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 CBFBQ13951 182 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 SCARB2Q14108 478 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 MAPK11Q15759 364 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 MAPK14Q16539 360 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 LIN52Q52LA3 116 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 NHSL2Q5HYW2 709 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 WIPI1Q5MNZ9 446 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-213ENST00000573577 RAET1LQ5VY80 246 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 FAM91A1Q658Y4 838 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 TMEM211Q6ICI0 200 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ZNF585AQ6P3V2 769 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 MYO7BQ6PIF6 2116 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ENPP6Q6UWR7 440 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 HACD2Q6Y1H2 254 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 RPRMLQ8N4K4 120 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 MARVELD2Q8N4S9 558 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 HIPK4Q8NE63 616 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 OR52P1PQ8NH57 321 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 OR10A6Q8NH74 314 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 NFKBIDQ8NI38 313 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ABTB1Q969K4 478 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ZBTB8AQ96BR9 441 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ZG16BQ96DA0 208 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 SFXN2Q96NB2 322 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 ZNF607Q96SK3 696 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 PIGQQ9BRB3 760 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 SLC39A3Q9BRY0 314 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 SPATA5L1Q9BVQ7 753 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 LAT2Q9GZY6 243 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 QRSL1Q9H0R6 528 aaKnown RBP12.27□□□□□ -0.45
RPAIN-213ENST00000573577 STOML1Q9UBI4 398 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 CARD8Q9Y2G2 431 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 KLF2Q9Y5W3 355 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-213ENST00000573577 DSPPQ9NZW4 1301 aa12.27□□□□□ -0.45
RPAIN-213ENST00000573577 GTF3C1Q12789 2109 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 CENPVL1A0A0U1RR11 272 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 C17orf51A8MQB3 221 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 GMFGO60234 142 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 ZIC3O60481 467 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 WDR1O75083 606 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 SERPINB7O75635 380 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 CYP7B1O75881 506 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 PGM3O95394 542 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 THBS1P07996 1170 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 UBTFL6P0CB48 400 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-213ENST00000573577 NID1P14543 1247 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 CHMP24386 653 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 COL8A1P27658 744 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 EIF1P41567 113 aaKnown RBP12.26□□□□□ -0.45
RPAIN-213ENST00000573577 NUDT2P50583 147 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 CCR4P51679 360 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 MNAT1P51948 309 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 CRYZQ08257 329 aaKnown RBP12.26□□□□□ -0.45
RPAIN-213ENST00000573577 SELPLGQ14242 412 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 SF3B4Q15427 424 aaKnown RBP eCLIP12.26□□□□□ -0.455e-17■■■■■ 28.1
RPAIN-213ENST00000573577 RPS26P11Q5JNZ5 115 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-213ENST00000573577 INTS11Q5TA45 600 aaKnown RBP12.26□□□□□ -0.45
RPAIN-213ENST00000573577 ERICH5Q6P6B1 374 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 NET1Q7Z628 596 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-213ENST00000573577 PM20D2Q8IYS1 436 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 OR5W2Q8NH69 310 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 TRIM8Q9BZR9 551 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 EXOSC3Q9NQT5 275 aaKnown RBP12.26□□□□□ -0.45
RPAIN-213ENST00000573577 NPDC1Q9NQX5 325 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-213ENST00000573577 TAGLN3Q9UI15 199 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 ICAM5Q9UMF0 924 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 RPH3AQ9Y2J0 694 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-213ENST00000573577 SLC6A5Q9Y345 797 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 NCKAP5O14513 1909 aa12.26□□□□□ -0.45
RPAIN-213ENST00000573577 PRORSD1PA6NEY8 169 aa12.25□□□□□ -0.45
RPAIN-213ENST00000573577 B4DXG7 233 aa12.25□□□□□ -0.45
RPAIN-213ENST00000573577 PRSS44E7EML9 344 aa12.25□□□□□ -0.45
RPAIN-213ENST00000573577 HOXD4P09016 255 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-213ENST00000573577 GABRA1P14867 456 aa12.25□□□□□ -0.45
RPAIN-213ENST00000573577 UQCRBP14927 111 aa12.25□□□□□ -0.45
RPAIN-213ENST00000573577 ZNF17P17021 662 aa12.25□□□□□ -0.45
RPAIN-213ENST00000573577 BMP7P18075 431 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms