RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 HHATLQ9HCP6 504 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 RHCGQ9UBD6 479 aa14.08□□□□□ -0.15
HERPUD1-219ENST00000570273 OR5H15A6NDH6 313 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 G3V3Y1 287 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 TAF4O00268 1085 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 CDK2AP1O14519 115 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ADAMDEC1O15204 470 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 TPST2O60704 377 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 SEMA7AO75326 666 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 E2F6O75461 281 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 SLC25A12O75746 678 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 CEACAM4O75871 244 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 RRM2P31350 389 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 IFNA8P32881 189 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 SLC6A8P48029 635 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 CDH12P55289 794 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ARG2P78540 354 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 C17orf67Q0P5P2 114 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 COL28A1Q2UY09 1125 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ENTPD8Q5MY95 495 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ZNF227Q86WZ6 799 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ICA1LQ8NDH6 482 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 TOR1AIP2Q8NFQ8 470 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 B4GALNT2Q8NHY0 566 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 NR4A3Q92570 626 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 SIGLEC12Q96PQ1 595 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ANGPTL4Q9BY76 406 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 TRIM2Q9C040 744 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 RNF32Q9H0A6 362 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 REEP1Q9H902 201 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 TMEM27Q9HBJ8 222 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 VNN3Q9NY84 501 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 RPS6KB2Q9UBS0 482 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 SAMHD1Q9Y3Z3 626 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 DOCK10Q96BY6 2186 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 SAC3D1A6NKF1 404 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 FFAR1O14842 300 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ADAM11O75078 769 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 NEURL1O76050 574 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 OR5F1O95221 314 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 NUDT14O95848 222 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 H1F0P07305 194 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 LINGO3P0C6S8 592 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ACAA2P42765 397 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 MASP1P48740 699 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 P2RX1P51575 399 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 COPZ1P61923 177 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 FOXD4Q12950 439 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 PIN1Q13526 163 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 OR1Q1Q15612 314 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 TRIP10Q15642 601 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 SPINK14Q6IE38 97 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 OR5M10Q6IEU7 315 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ZNF605Q86T29 641 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 TSPYL5Q86VY4 417 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 OFCC1Q8IZS5 231 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 CADM2Q8N3J6 435 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 OR4K17Q8NGC6 315 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 OR5W2Q8NH69 310 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 FNDC11Q9BVV2 318 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 POLR2J2Q9GZM3 115 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.07□□□□□ -0.162e-8■■■□□ 18.7
HERPUD1-219ENST00000570273 POLR2J3Q9H1A7 115 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 STOML1Q9UBI4 398 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 ACAD8Q9UKU7 415 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 A4GNTQ9UNA3 340 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 HRH3Q9Y5N1 445 aa14.07□□□□□ -0.16
HERPUD1-219ENST00000570273 MED13Q9UHV7 2174 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 CPAMD8Q8IZJ3 1885 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 EPG5Q9HCE0 2579 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 A0A0G2JMM0 328 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 A0A1W2PPB8 328 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 A0A1W2PRS3 328 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 TRAPPC13A5PLN9 417 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 ANKRD33BA6NCL7 494 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 ANKUB1A6NFN9 424 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 KIR3DP1A8MWS1 328 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 TNFRSF11BO00300 401 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 GNB5O14775 395 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 SNPHO15079 494 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 PRSS23O95084 383 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 PGCP20142 388 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 DNASE1L1P49184 302 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 IST1P53990 364 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 SUMO3P55854 103 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 SMIM11AP58511 58 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 PPP1R8Q12972 351 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 CBFBQ13951 182 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 SNCBQ16143 134 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 FGD3Q5JSP0 725 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 BORAQ6PGQ7 559 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 PACS2Q86VP3 889 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 PIK3C3Q8NEB9 887 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 ZNF563Q8TA94 476 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 ADAMTS16Q8TE57 1224 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 SLC41A3Q96GZ6 507 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 ZNF597Q96LX8 424 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 JSRP1Q96MG2 331 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 C5orf34Q96MH7 638 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 NMNAT1Q9HAN9 279 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms