RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CSTAP01040 98 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 TMIGD3P0DMS9 266 aaPredicted RBP12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 NR2F1P10589 423 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 BMP5P22003 454 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 PSMA4P25789 261 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 ADH6P28332 368 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 OPRM1P35372 400 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 CRATP43155 626 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 MVDP53602 400 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 CLDN20P56880 219 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 RAC1P63000 192 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 CHRNEQ04844 493 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 CBFBQ13951 182 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 FGFBP1Q14512 234 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 MAPK14Q16539 360 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 GTDC1Q4AE62 458 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 POMZP3Q6PJE2 187 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC2A7Q6PXP3 512 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 EIF3MQ7L2H7 374 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 P4HA3Q7Z4N8 544 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 ANKFN1Q8N957 763 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 ACBD4Q8NC06 268 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 OR5W2Q8NH69 310 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 POC1BQ8TC44 478 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 SMPDL3BQ92485 455 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 PMM1Q92871 262 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 ZG16BQ96DA0 208 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 ARSGQ96EG1 525 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 RNF145Q96MT1 663 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 NPAS1Q99742 590 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 KLHDC3Q9BQ90 382 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 PAIP1Q9H074 479 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 RAD21L1Q9H4I0 556 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 MTHFD2LQ9H903 347 aaPredicted RBP12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC52A3Q9NQ40 469 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 THUMPD1Q9NXG2 353 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC35A3Q9Y2D2 325 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 L3MBTL1Q9Y468 752 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 GPC6Q9Y625 555 aaPredicted RBP12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 CENPVL1A0A0U1RR11 272 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 H0YC42 278 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 CLIC1O00299 241 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 NR5A2O00482 541 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 CYP7B1O75881 506 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 TGM6O95932 706 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 SNRPB2P08579 225 aaKnown RBP12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 TROVE2P10155 538 aaKnown RBP eCLIP12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 ETFAP13804 333 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 PGM1P36871 562 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 TPD52P55327 224 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 DSTNP60981 165 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 EEF1A1P68104 462 aaKnown RBP12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 KCNJ10P78508 379 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 SGCBQ16585 318 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 NDUFAF6Q330K2 333 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 LRIF1Q5T3J3 769 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 EEF1A1P5Q5VTE0 462 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 METTL21CQ5VZV1 264 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 PLXDC2Q6UX71 529 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 GGNQ86UU5 652 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 TMCO5AQ8N6Q1 288 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 METTL25Q8N6Q8 603 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 RELL2Q8NC24 303 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 LRRC46Q96FV0 321 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 AURKBQ96GD4 344 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 PINK1Q9BXM7 581 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC38A1Q9H2H9 487 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 NPDC1Q9NQX5 325 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 PAQR5Q9NXK6 330 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 CALML5Q9NZT1 146 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 P2RX2Q9UBL9 471 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 NOTCH2Q04721 2471 aa12.44□□□□□ -0.42
HERPUD1-218ENST00000569569 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 A0A1W2PP18 115 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 TMEM247A6NEH6 219 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC22A20A6NK97 555 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 SYT5O00445 386 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 EIF1AYO14602 144 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 DNAJA2O60884 412 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 CHRM4P08173 479 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 VIMP08670 466 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 UBTFL6P0CB48 400 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 PRKCAP17252 672 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 HOXB9P17482 250 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 IGFBP2P18065 325 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 PGCP20142 388 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 CAPN3P20807 821 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 ME2P23368 584 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 ELK4P28324 431 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 ASCL1P50553 236 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 CCR4P51679 360 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 AGFG1P52594 562 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 GUCY1A3Q02108 690 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 FOXF1Q12946 379 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 FADDQ13158 208 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 SKP2Q13309 424 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 RGNQ15493 299 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 TOMM34Q15785 309 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC25A53Q5H9E4 307 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms