RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 CNOT3O75175 753 aaKnown RBP6.5□□□□□ -1.37
SMG1-215ENST00000568239 INMTO95050 263 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 IL33O95760 270 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 NUDT14O95848 222 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 MT-ND2P03891 347 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 FGF5P12034 268 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 PAX7P23759 505 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 ITPKBP27987 946 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 ABCD3P28288 659 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 SMSP52788 366 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 MVKQ03426 396 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 SPEM2Q0P670 501 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 SLX4IPQ5VYV7 408 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 XAF1Q6GPH4 301 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 ACSM5Q6NUN0 579 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 SLC27A4Q6P1M0 643 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 CBLN3Q6UW01 205 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 ZSCAN1Q8NBB4 408 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 B3GNT7Q8NFL0 401 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 RORBQ92753 470 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 OMA1Q96E52 524 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 DEPDC7Q96QD5 511 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 SPSB2Q99619 263 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 TRIM2Q9C040 744 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 DUSP21Q9H596 190 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 CCNB1IP1Q9NPC3 277 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMG1-215ENST00000568239 GPR52Q9Y2T5 361 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 CLCA1A8K7I4 914 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 NPIPB9F8W1W9 429 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 WWP2O00308 870 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 PRKYO43930 277 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 FMO6PO60774 539 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 ENTPD6O75354 484 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 TP53P04637 393 aaPredicted RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 GP1BAP07359 652 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 STSP08842 583 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 ZNF883P0CG24 379 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 UBL4AP11441 157 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 NR4A1P22736 598 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 PSMB9P28065 219 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 ACAA2P42765 397 aaKnown RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 DCAF7P61962 342 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 RNF4P78317 190 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 CRYZQ08257 329 aaKnown RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 CLPPQ16740 277 aaPredicted RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 KLHL26Q53HC5 615 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 PLA2G2CQ5R387 149 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 ZNF385CQ66K41 422 aaPredicted RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 ZNF613Q6PF04 617 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 POMZP3Q6PJE2 187 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 SMARCD3Q6STE5 483 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 KIRREL2Q6UWL6 708 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 APOOLQ6UXV4 268 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 BPHLQ86WA6 291 aaPredicted RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 CACTIN-AS1Q8N1I8 211 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 TOR1AIP2Q8NFQ8 470 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 OR51A7Q8NH64 312 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 ZNF563Q8TA94 476 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 IPCEF1Q8WWN9 437 aaPredicted RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 GGHQ92820 318 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 BPIFA2Q96DR5 249 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 PLEKHA8Q96JA3 519 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 EDEM2Q9BV94 578 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 TBL1XR1Q9BZK7 514 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 HOXD1Q9GZZ0 328 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 RBM38Q9H0Z9 239 aaKnown RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 SLC35A3Q9Y2D2 325 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 OTOGLQ3ZCN5 2332 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 A0A0B4J2E0 115 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 TRBV11-1A0A0K0K1C0 115 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 A0A1B0GX12 115 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 C17orf51A8MQB3 221 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 C9J4A7 227 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 E9PQ18 207 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 CDX4O14627 284 aaPredicted RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 HCRTR2O43614 444 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 NDUFB5O43674 189 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 CHP2O43745 196 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 SCO2O43819 266 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 NOL3O60936 208 aaKnown RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 BMP7P18075 431 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 GABRB1P18505 474 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 CCNA2P20248 432 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 MAKP20794 623 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 FPR3P25089 353 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 PCYT1AP49585 367 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 ST13P50502 369 aaKnown RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 NRG3P56975 720 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 CSNK2BP67870 215 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 ST3GAL4Q11206 333 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 ULK3Q6PHR2 472 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 CD300LDQ6UXZ3 194 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 RASSF6Q6ZTQ3 369 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 CPEB2Q7Z5Q1 589 aaKnown RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 MARCH3Q86UD3 253 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 GRAMD2AQ8IUY3 354 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 CMIPQ8IY22 773 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 BMPERQ8N8U9 685 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 GALNT6Q8NCL4 622 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms