RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	TMEM176B	Q3YBM2	270 aa	Predicted RBP	10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	EXOSC6	Q5RKV6	272 aa	Known RBP	10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	TIMM23B	Q5SRD1	257 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	CYB5R2	Q6BCY4	276 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	THSD4	Q6ZMP0	1018 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169		Q6ZSR9	355 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	P2RY8	Q86VZ1	359 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	SLC16A11	Q8NCK7	471 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	MUCL1	Q96DR8	90 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	L3HYPDH	Q96EM0	354 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	GIMAP5	Q96F15	307 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	ZNF764	Q96H86	408 aa	Predicted RBP	10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	RADIL	Q96JH8	1075 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	SHARPIN	Q9H0F6	387 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	CXorf36	Q9H7Y0	433 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	CBLN4	Q9NTU7	201 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	PRSS50	Q9UI38	385 aa		10.06	□□□□□ -0.8
TCF4-238	ENST00000568169	POLR3H	Q9Y535	204 aa	Predicted RBP	10.06	□□□□□ -0.8
TCF4-238	ENST00000568169		E7EQL1	145 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	POC1B-GALNT4	F8VUJ3	575 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	KIF2A	O00139	706 aa	Predicted RBP	10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	SCD	O00767	359 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	LMX1B	O60663	402 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	SNRPA	P09012	282 aa	Known RBP	10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	IGHV4-31	P0DP07	118 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	COX5A	P20674	150 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	IGHV1-2	P23083	117 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	EDNRA	P25101	427 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	RAC3	P60763	192 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	ZNF117	Q03924	483 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	STK11	Q15831	433 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	NOXRED1	Q6NXP6	359 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	TRIM46	Q7Z4K8	759 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	MTERF4	Q7Z6M4	381 aa	Known RBP	10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	SLC22A9	Q8IVM8	553 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	ZNF525	Q8N782	197 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	ARIH2OS	Q8N7S6	290 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	NUP43	Q8NFH3	380 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	FBXO27	Q8NI29	283 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	C10orf105	Q8TEF2	133 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	ZFP90	Q8TF47	636 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	FAM168A	Q92567	244 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	PROX1	Q92786	737 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	EGLN2	Q96KS0	407 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	MS4A4E	Q96PG1	132 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	DHRS9	Q9BPW9	319 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	PSD2	Q9BQI7	771 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	GSTO2	Q9H4Y5	243 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	KLHL9	Q9P2J3	617 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	ICAM5	Q9UMF0	924 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	MGAT4B	Q9UQ53	548 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	ACTL7B	Q9Y614	415 aa		10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	GPC6	Q9Y625	555 aa	Predicted RBP	10.05	□□□□□ -0.8
TCF4-238	ENST00000568169	OR5H1	A6NKK0	313 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	NPIPB8	E9PQR5	432 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169		H7C417	338 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	UBFD1	O14562	309 aa	Known RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	PDPK1	O15530	556 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	OIP5	O43482	229 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	RSL1D1	O76021	490 aa	Known RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	HSPA4L	O95757	839 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	ALOX5	P09917	674 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	GGT1	P19440	569 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	GPC1	P35052	558 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	FRK	P42685	505 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	SERPINB4	P48594	390 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	P2RX1	P51575	399 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	PRKAG1	P54619	331 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	SUMO3	P55854	103 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	SRSF2	Q01130	221 aa	Known RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	KIAA0040	Q15053	153 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	RAB35	Q15286	201 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	IMPG1	Q17R60	797 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	ZNF385B	Q569K4	471 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	CCNJ	Q5T5M9	372 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	ZCCHC12	Q6PEW1	402 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	CBLN3	Q6UW01	205 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	TIFAB	Q6ZNK6	161 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	ZNF572	Q7Z3I7	529 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	LCA5	Q86VQ0	697 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	MUC15	Q8N387	334 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	ZNF433	Q8N7K0	673 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	COX18	Q8N8Q8	333 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	ANKK1	Q8NFD2	765 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	ZFP28	Q8NHY6	868 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	FBXO30	Q8TB52	745 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	PHOSPHO1	Q8TCT1	267 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	ZNF75CP	Q92670	426 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	HTRA1	Q92743	480 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	CIDEC	Q96AQ7	238 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	C16orf58	Q96GQ5	468 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	METTL2A	Q96IZ6	378 aa	Known RBP	10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	BTBD2	Q9BX70	525 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	MANSC1	Q9H8J5	431 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	MID1IP1	Q9NPA3	183 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	CCL27	Q9Y4X3	112 aa		10.04	□□□□□ -0.8
TCF4-238	ENST00000568169	IGHV3-15	A0A0B4J1V0	119 aa		10.03	□□□□□ -0.8
TCF4-238	ENST00000568169		A0A1W2PNR3	127 aa		10.03	□□□□□ -0.8
TCF4-238	ENST00000568169	ZNF724	A8MTY0	619 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms