RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SH3YL1Q96HL8 342 aaPredicted RBP11.22□□□□□ -0.61
RNF40-211ENST00000567365 UCN2Q96RP3 112 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 SLC39A3Q9BRY0 314 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 NSRP1Q9H0G5 558 aaKnown RBP11.22□□□□□ -0.61
RNF40-211ENST00000567365 NANOGQ9H9S0 305 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 EXOSC3Q9NQT5 275 aaKnown RBP11.22□□□□□ -0.61
RNF40-211ENST00000567365 CALML5Q9NZT1 146 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.22□□□□□ -0.61
RNF40-211ENST00000567365 DKKL1Q9UK85 242 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 ACAD8Q9UKU7 415 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 SLC35A3Q9Y2D2 325 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 ZNF337Q9Y3M9 751 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 LOC100653049A0A140TA62 436 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 FIGNL2A6NMB9 653 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 AHRRA9YTQ3 701 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 SHISA8B8ZZ34 492 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 LINC01387J3KSC0 135 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 EFNA2O43921 213 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 ZG16O60844 167 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 GCM2O75603 506 aaPredicted RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 KRT34O76011 436 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 PGM3O95394 542 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 DBIP07108 87 aaKnown RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 THBS1P07996 1170 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 HOXD4P09016 255 aaPredicted RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 GLI4P10075 376 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 NID1P14543 1247 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 GABRA1P14867 456 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 PTGER4P35408 488 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 STARP49675 285 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 CRISP3P54108 245 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 CASP6P55212 293 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 PCBP3P57721 371 aaKnown RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 MTPNP58546 118 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 EEF1A1P68104 462 aaKnown RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 KCNJ10P78508 379 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 HPCAP84074 193 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 CAPRIN1Q14444 709 aaKnown RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 TOMM34Q15785 309 aaPredicted RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 ACSF3Q4G176 576 aaPredicted RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 RPS26P11Q5JNZ5 115 aaPredicted RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 GCNT6Q5T4J0 391 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 C8orf82Q6P1X6 216 aaPredicted RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 EIF3MQ7L2H7 374 aaKnown RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 CPLX4Q7Z7G2 160 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 CALHM3Q86XJ0 350 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 ZNF614Q8N883 585 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 ANKS4BQ8N8V4 417 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 OR5W2Q8NH69 310 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 RP9Q8TA86 221 aaKnown RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 ZPLD1Q8TCW7 415 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 CNOT9Q92600 299 aaKnown RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 ZBTB8AQ96BR9 441 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 SFXN2Q96NB2 322 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 GPATCH1Q9BRR8 931 aaKnown RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 FAM107BQ9H098 131 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 EXO5Q9H790 373 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 DNAJB12Q9NXW2 375 aaKnown RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 SH3BGRL2Q9UJC5 107 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 CORO2BQ9UQ03 480 aa11.21□□□□□ -0.61
RNF40-211ENST00000567365 RPH3AQ9Y2J0 694 aaPredicted RBP11.21□□□□□ -0.61
RNF40-211ENST00000567365 CACNA1CQ13936 2221 aa11.21□□□□□ -0.62
RNF40-211ENST00000567365 DOCK7Q96N67 2140 aa11.21□□□□□ -0.62
RNF40-211ENST00000567365 CRYBG3Q68DQ2 2970 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 CDHR4A6H8M9 788 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 EVPLLA8MZ36 301 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 MRASO14807 208 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 TOXO94900 526 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 EPPINO95925 133 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 CSTAP01040 98 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 COX4I1P13073 169 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 ETS2P15036 469 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 PRKCAP17252 672 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 AGAP20933 346 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 ADH6P28332 368 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 PER3P56645 1201 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 CLDN20P56880 219 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 CDK6Q00534 326 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 RBBP4Q09028 425 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 CYLC2Q14093 348 aaPredicted RBP11.2□□□□□ -0.62
RNF40-211ENST00000567365 GNA13Q14344 377 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 CDSNQ15517 529 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 C1orf185Q5T7R7 199 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 RNF220Q5VTB9 566 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 RAET1LQ5VY80 246 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 FAM91A1Q658Y4 838 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 MTFR2Q6P444 385 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 AAGABQ6PD74 315 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 ENPP6Q6UWR7 440 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 GGNQ86UU5 652 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 VRK2Q86Y07 508 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 GRAMD2AQ8IUY3 354 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 PM20D2Q8IYS1 436 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 POU5F2Q8N7G0 328 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 OR8J3Q8NGG0 315 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 OR5M1Q8NGP8 315 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 OR52P1PQ8NH57 321 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 WDR60Q8WVS4 1066 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 ADGRG7Q96K78 797 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms