RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 RPRD1AQ96P16 312 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-209ENST00000566240 MCCC1Q96RQ3 725 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-209ENST00000566240 CCNL2Q96S94 520 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-209ENST00000566240 NPY6RQ99463 290 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 CITED1Q99966 193 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 RBM4BQ9BQ04 359 aaKnown RBP3.96□□□□□ -1.78
CNOT1-209ENST00000566240 SLC39A3Q9BRY0 314 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 KRTAP1-5Q9BYS1 174 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 LRRN3Q9H3W5 708 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 TM9SF3Q9HD45 589 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 NMRK1Q9NWW6 199 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 SIGLEC8Q9NYZ4 499 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 IL36GQ9NZH8 169 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 DHRS4-AS1Q9P1J3 65 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 WRAP73Q9P2S5 460 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-209ENST00000566240 RASD1Q9Y272 281 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 L3MBTL1Q9Y468 752 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 SOGA1O94964 1423 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 PBRM1Q86U86 1689 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 KANK1Q14678 1352 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 TRAV9-2A0A087WT02 112 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 FAM240BA0A1B0GVZ2 78 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 ZNF840PA6NDX5 716 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 ACOD1A6NK06 481 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 EFCAB7A8K855 629 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 SLC17A2O00624 439 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 TAPBPO15533 448 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 RS1O15537 224 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 TSC22D2O75157 780 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 KBTBD11O94819 623 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 GJB5O95377 273 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 SLC2A10O95528 541 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 SERPINA3P01011 423 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 IGHV3-13P01766 116 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 PIGRP01833 764 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 CD55P08174 381 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 HSMCR30P0CW71 290 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 LAMP1P11279 417 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 NCK1P16333 377 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 SERPINA2P20848 420 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 PTBP1P26599 531 aaKnown RBP eCLIP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 GDI1P31150 447 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 ELK3P41970 407 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 CCT3P49368 545 aaKnown RBP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 LIM2P55344 173 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 RPL23AP62750 156 aaKnown RBP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 C1orf61Q13536 156 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 MRGPRG-AS1Q2M3A8 158 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 TP53I3Q53FA7 332 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 OR4F3Q6IEY1 312 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 ZNF600Q6ZNG1 722 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 SERPINA9Q86WD7 417 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 NBPF5PQ86XG9 351 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 SLC22A9Q8IVM8 553 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 DHRSXQ8N5I4 330 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 NR4A3Q92570 626 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 PPP1R16AQ96I34 528 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 TPD52L3Q96J77 140 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 RBM14Q96PK6 669 aaKnown RBP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 PPDPFQ9H3Y8 114 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 GLIPR2Q9H4G4 154 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 FANCFQ9NPI8 374 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 PNO1Q9NRX1 252 aaKnown RBP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 CTNNA3Q9UI47 895 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 SAMD4AQ9UPU9 718 aaKnown RBP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 SCML2Q9UQR0 700 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 POLDIP2Q9Y2S7 368 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 USP16Q9Y5T5 823 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 PRSS21Q9Y6M0 314 aa3.95□□□□□ -1.78
CNOT1-209ENST00000566240 TDRD15B5MCY1 1934 aaKnown RBP3.95□□□□□ -1.78
CNOT1-209ENST00000566240 IGHV2-70DA0A0C4DH43 119 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 FAM220BPB1ANY3 271 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 E9PLD3 99 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 NOL4O94818 638 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 POU2F1P14859 743 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 MAGEA8P43361 318 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 ATP5IP56385 69 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-209ENST00000566240 ERVPABLB-1P60509 514 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 SLC25A52Q3SY17 297 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 SFT2D3Q587I9 215 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 BEND3Q5T5X7 828 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 CCDC50Q8IVM0 306 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 MCOLN2Q8IZK6 566 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 FGFRL1Q8N441 504 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 KIR3DL3Q8N743 410 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 OR51G2Q8NGK0 314 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 SCFD1Q8WVM8 642 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 RASL10AQ92737 203 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 SOSTQ9BQB4 213 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 SGK2Q9HBY8 427 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 ADAM28Q9UKQ2 775 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 KLK13Q9UKR3 277 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 TIMM10BQ9Y5J6 103 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 TOPBP1Q92547 1522 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 CNTNAP2Q9UHC6 1331 aa3.94□□□□□ -1.78
CNOT1-209ENST00000566240 ATP10AO60312 1499 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 A0A0U1RQS6 177 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 SNTNA6NMZ2 147 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms