RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ARPC2O15144 300 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 PFDN6O15212 129 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ACOX3O15254 700 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 SEMA4FO95754 770 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 JCHAINP01591 159 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ABCB1P08183 1280 aaPredicted RBP3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ITIH1P19827 911 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ATP6V1B2P21281 511 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 CBLP22681 906 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ELAVL4P26378 380 aaKnown RBP3.83□□□□□ -1.8
LINC00561-201ENST00000565815 TPMTP51580 245 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ALDH3A2P51648 485 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ACVR1Q04771 509 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 EEF1A2Q05639 463 aaKnown RBP3.83□□□□□ -1.8
LINC00561-201ENST00000565815 KRR1Q13601 381 aaKnown RBP3.83□□□□□ -1.8
LINC00561-201ENST00000565815 RCAN2Q14206 197 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 WSCD1Q658N2 575 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF470Q6ECI4 717 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 OR7E24Q6IFN5 339 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 CES3Q6UWW8 571 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 KCTD8Q6ZWB6 473 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 Q75L30 129 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 PYROXD2Q8N2H3 581 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 CARNMT1Q8N4J0 409 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 WDR36Q8NI36 951 aaKnown RBP3.83□□□□□ -1.8
LINC00561-201ENST00000565815 CANT1Q8WVQ1 401 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 DAZLQ92904 295 aaKnown RBP3.83□□□□□ -1.8
LINC00561-201ENST00000565815 SH3GL1Q99961 368 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 OMDQ99983 421 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 MROQ9BYG7 248 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 FBXO44Q9H4M3 255 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 MAGIXQ9H6Y5 334 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 CSNK1G1Q9HCP0 422 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 PIGVQ9NUD9 493 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 CCDC167Q9P0B6 97 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 IL36RNQ9UBH0 155 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ERVW-1Q9UQF0 538 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 NAALAD2Q9Y3Q0 740 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 AP1M2Q9Y6Q5 423 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ATG2BQ96BY7 2078 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ABCA7Q8IZY2 2146 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 URB1O60287 2271 aaKnown RBP3.83□□□□□ -1.8
LINC00561-201ENST00000565815 CDH23Q9H251 3354 aa3.83□□□□□ -1.8
LINC00561-201ENST00000565815 ASPDHA6ND91 283 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 NEMP2A6NFY4 417 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CLDN25C9JDP6 229 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 NME4O00746 187 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 DLGAP1O14490 977 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 SLC22A1O15245 554 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 EPOP01588 193 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 IGLV3-25P01717 112 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 UGT2B4P06133 528 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CCDC159P0C7I6 412 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CISD3P0C7P0 127 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 SLC2A3P11169 496 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 UGT1A6P19224 532 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 UGT1A4P22310 534 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 JAK1P23458 1154 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 MPZP25189 248 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 PSMA3P25788 255 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 UGT1A3P35503 534 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 UGT1A5P35504 534 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CAPZA2P47755 286 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 SERPINH1P50454 418 aaKnown RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 TPD52P55327 224 aaPredicted RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CXCR4P61073 352 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CSNK2BP67870 215 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 EMX2Q04743 252 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 LCP2Q13094 533 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 LY6DQ14210 128 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 GK3PQ14409 553 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 TGFBIQ15582 683 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 UGT3A2Q3SY77 523 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CYBRD1Q53TN4 286 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF776Q68DI1 518 aaPredicted RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 ANKRD26P1Q6NSI1 321 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CLEC20AQ6ZU45 233 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 PRSS48Q7RTY5 328 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 DSG4Q86SJ6 1040 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 EPHX4Q8IUS5 362 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 LACC1Q8IV20 430 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 PM20D2Q8IYS1 436 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 FAM9CQ8IZT9 166 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 C8orf59Q8N0T1 100 aaPredicted RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CENPSQ8N2Z9 138 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 SLC38A9Q8NBW4 561 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF555Q8NEP9 628 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 OR8J3Q8NGG0 315 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 SMARCD1Q96GM5 515 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 ATXN7L3BQ96GX2 97 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 FER1L6-AS2Q96M78 137 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CGREF1Q99674 301 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 KCTD14Q9BQ13 255 aaPredicted RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 OR10A4Q9H209 315 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CXCL16Q9H2A7 254 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 KCNK15Q9H427 330 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 RAB9BQ9NP90 201 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CCNB1IP1Q9NPC3 277 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 AIG1Q9NVV5 245 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 DDIT4Q9NX09 232 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms