RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ADAMDEC1O15204 470 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 EEDO75530 441 aaKnown RBP7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 ESRRBO95718 433 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 KRT6AP02538 564 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 KRT6BP04259 564 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 FGF4P08620 206 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 NEFHP12036 1026 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 HSD3B1P14060 373 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 GGT1P19440 569 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 CD40P25942 277 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 HSD3B2P26439 372 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 ALDH3A1P30838 453 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 SERPINB4P48594 390 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 KRT6CP48668 564 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 MGAT2Q10469 447 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 DDX39BQ13838 428 aaKnown RBP7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 PRICKLE4Q2TBC4 344 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 FBXO48Q5FWF7 155 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 TCHHL1Q5QJ38 904 aaPredicted RBP7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 ATG16L1Q676U5 607 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 FAM111BQ6SJ93 734 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 Q6ZT83 130 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 FRMD7Q6ZUT3 714 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 NUFIP2Q7Z417 695 aaKnown RBP7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 ARFGAP2Q8N6H7 521 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 CCNYL1Q8N7R7 359 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 OR52R1Q8NGF1 315 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 OR6Y1Q8NGX8 325 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 OR2V1Q8NHB1 315 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 HUS1BQ8NHY5 278 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 TRPC4APQ8TEL6 797 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 RNF138Q8WVD3 245 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 OSTF1Q92882 214 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 ARL8AQ96BM9 186 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 C1GALT1C1Q96EU7 318 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 METTL2AQ96IZ6 378 aaKnown RBP7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 TMEM237Q96Q45 408 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 CCT7Q99832 543 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 GATA5Q9BWX5 397 aaPredicted RBP7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 BPESC1Q9GZL8 116 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 GSTO2Q9H4Y5 243 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 FKRPQ9H9S5 495 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 BRF2Q9HAW0 419 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 GP6Q9HCN6 339 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 TIGARQ9NQ88 270 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 MED29Q9NX70 200 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 AHSPQ9NZD4 102 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 ZNF639Q9UID6 485 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 PSME2Q9UL46 239 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 USP22Q9UPT9 525 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 ATP23Q9Y6H3 246 aa7.97□□□□□ -1.13
VPS9D1-205ENST00000565452 TMEM114B3SHH9 223 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 B4DSR2 109 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 B4DXG7 233 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 ZNF814B7Z6K7 855 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 SCO2O43819 266 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 TMPRSS11DO60235 418 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 ULK1O75385 1050 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 LYZL6O75951 148 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 SASH3O75995 380 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 PRKD3O94806 890 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 SERPINE1P05121 402 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 YES1P07947 543 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 TACSTD2P09758 323 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 UROSP10746 265 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 CSNK2A2P19784 350 aaPredicted RBP7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 EVI2BP34910 448 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 BSGP35613 385 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 ARL1P40616 181 aaPredicted RBP7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 EMDP50402 254 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 CDH13P55290 713 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 CDH15P55291 814 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 RAC1P63000 192 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 IFT88Q13099 833 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 TRAF3Q13114 568 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 CUL3Q13618 768 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 MPP2Q14168 576 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 CPSF6Q16630 551 aaKnown RBP eCLIP7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 ZSWIM7Q19AV6 140 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 TMEM44Q2T9K0 475 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 FRG2Q64ET8 278 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 HBMQ6B0K9 141 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 TTC19Q6DKK2 380 aaPredicted RBP7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 RNF165Q6ZSG1 346 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 GPRIN3Q6ZVF9 776 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 ESPNLQ6ZVH7 1005 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 GLCCI1Q86VQ1 547 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 TUSC5Q8IXB3 177 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 OR4F6Q8NGB9 312 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 WDR20Q8TBZ3 569 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 FAM110BQ8TC76 370 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 METTL6Q8TCB7 284 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 FRG2BQ96QU4 278 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 MTERF1Q99551 399 aaKnown RBP7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 VRK1Q99986 396 aaPredicted RBP7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 SUCNR1Q9BXA5 334 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 ZNF446Q9NWS9 450 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 NPAP1Q9NZP6 1156 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 RNF11Q9Y3C5 154 aa7.96□□□□□ -1.14
VPS9D1-205ENST00000565452 GRIP1Q9Y3R0 1128 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms