RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 RNPS1Q15287 305 aaKnown RBP5.73□□□□□ -1.49
TCF4-228ENST00000565393 TOMM34Q15785 309 aaPredicted RBP5.73□□□□□ -1.49
TCF4-228ENST00000565393 NDUFAF6Q330K2 333 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 ARHGAP11BQ3KRB8 267 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 XKR7Q5GH72 579 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 BEX5Q5H9J7 111 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 EXOSC6Q5RKV6 272 aaKnown RBP5.73□□□□□ -1.49
TCF4-228ENST00000565393 PDZK1Q5T2W1 519 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 ATAD3BQ5T9A4 648 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 ANXA8L1Q5VT79 327 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 WDR93Q6P2C0 686 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 CLEC9AQ6UXN8 241 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 STAC2Q6ZMT1 411 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 FCRLAQ7L513 359 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 C16orf62Q7Z3J2 963 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 NUFIP2Q7Z417 695 aaKnown RBP5.73□□□□□ -1.49
TCF4-228ENST00000565393 ANKRD46Q86W74 232 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 RIMKLAQ8IXN7 391 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 CLECL1Q8IZS7 167 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 ZNF781Q8N8C0 355 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 OR4A15Q8NGL6 344 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 OR5W2Q8NH69 310 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 ZNF563Q8TA94 476 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 AENQ8WTP8 325 aaKnown RBP5.73□□□□□ -1.49
TCF4-228ENST00000565393 RAB8BQ92930 207 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 CAVIN3Q969G5 261 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 CPNE4Q96A23 557 aaPredicted RBP5.73□□□□□ -1.49
TCF4-228ENST00000565393 PERPQ96FX8 193 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 PLPPR2Q96GM1 343 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 ADGRG7Q96K78 797 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 HS3ST6Q96QI5 342 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 OR5B2Q96R09 309 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 TACO1Q9BSH4 297 aaKnown RBP5.73□□□□□ -1.49
TCF4-228ENST00000565393 BDH2Q9BUT1 245 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 TMEM109Q9BVC6 243 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 ACTR6Q9GZN1 396 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 GPATCH2Q9NW75 528 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 ICAM5Q9UMF0 924 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.73□□□□□ -1.49
TCF4-228ENST00000565393 RAP2CQ9Y3L5 183 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 TEX15Q9BXT5 2789 aa5.73□□□□□ -1.49
TCF4-228ENST00000565393 RNF103-CHMP3A0A140T963 221 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.72□□□□□ -1.49
TCF4-228ENST00000565393 A0A1W2PNR3 127 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 RNASET2O00584 256 aaKnown RBP5.72□□□□□ -1.49
TCF4-228ENST00000565393 SIAH2O43255 324 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 KLF4O43474 513 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 UGT2B17O75795 530 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 AGR2O95994 175 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 PLAUP00749 431 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 CSTAP01040 98 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 THBDP07204 575 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 UBTFL6P0CB48 400 aaPredicted RBP5.72□□□□□ -1.49
TCF4-228ENST00000565393 PRKCAP17252 672 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 LBPP18428 481 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 CCNA2P20248 432 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 UQCRC2P22695 453 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 IL32P24001 234 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 S100A3P33764 101 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 RYKP34925 604 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 CHI3L1P36222 383 aaPredicted RBP5.72□□□□□ -1.49
TCF4-228ENST00000565393 NR1H2P55055 460 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 SUMO3P55854 103 aaPredicted RBP5.72□□□□□ -1.49
TCF4-228ENST00000565393 NME5P56597 212 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 RAC3P60763 192 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 LTBQ06643 244 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 RASGEF1BQ0VAM2 473 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 MERTKQ12866 999 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 QPRTQ15274 297 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 GUSBP1Q15486 140 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 TSC22D1Q15714 1073 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 SMU1Q2TAY7 513 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 TIGD2Q4W5G0 525 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 GPAT3Q53EU6 434 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 Q5PR19 223 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 CEP85LQ5SZL2 805 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.72□□□□□ -1.49
TCF4-228ENST00000565393 EIF3MQ7L2H7 374 aaKnown RBP5.72□□□□□ -1.49
TCF4-228ENST00000565393 OLIG3Q7RTU3 272 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 YTHDF3Q7Z739 585 aaKnown RBP5.72□□□□□ -1.49
TCF4-228ENST00000565393 BIVMQ86UB2 503 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 CXorf67Q86X51 503 aaPredicted RBP5.72□□□□□ -1.49
TCF4-228ENST00000565393 SLC43A2Q8N370 569 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 STEAP2Q8NFT2 490 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 PSMA8Q8TAA3 256 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 SFXN5Q8TD22 340 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 ABHD3Q8WU67 409 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 TMEM171Q8WVE6 324 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 TMEM234Q8WY98 164 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 HSD17B8Q92506 261 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 S100PBPQ96BU1 408 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 POM121Q96HA1 1249 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 SLC35G5Q96KT7 338 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 MRGPRX4Q96LA9 322 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 Q96MF0 132 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 PIP5K1AQ99755 562 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 SRXN1Q9BYN0 137 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 NUF2Q9BZD4 464 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 LAT2Q9GZY6 243 aa5.72□□□□□ -1.49
TCF4-228ENST00000565393 QRSL1Q9H0R6 528 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms