RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ETV5P41161 510 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 RBM34P42696 430 aaKnown RBP17.96■□□□□ 0.47
CLN6-205ENST00000564846 GIPRP48546 466 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 SLC26A5P58743 744 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 COPZ1P61923 177 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 SLC35A2P78381 396 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 SMN1Q16637 294 aaKnown RBP17.96■□□□□ 0.47
CLN6-205ENST00000564846 ALG10BQ5I7T1 473 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 PTCHD4Q6ZW05 846 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 GALNT6Q8NCL4 622 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 WDR36Q8NI36 951 aaKnown RBP17.96■□□□□ 0.47
CLN6-205ENST00000564846 TEX47Q8TBZ9 253 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 IPCEF1Q8WWN9 437 aaPredicted RBP17.96■□□□□ 0.47
CLN6-205ENST00000564846 TAAR9Q96RI9 348 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 NODALQ96S42 347 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 CCNB1IP1Q9NPC3 277 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 PAK1IP1Q9NWT1 392 aaPredicted RBP17.96■□□□□ 0.47
CLN6-205ENST00000564846 SELENONQ9NZV5 590 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 TMEM5Q9Y2B1 443 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 MED31Q9Y3C7 131 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 ZNF318Q5VUA4 2279 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 LOC102723996A0A087X1L8 192 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 A0A1W2PQD3 144 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 GTPBP1O00178 669 aaKnown RBP17.96■□□□□ 0.47
CLN6-205ENST00000564846 ZNF264O43296 627 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 PIP5K1CO60331 668 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 ICOSLGO75144 302 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 ENDOUP21128 410 aaKnown RBP17.96■□□□□ 0.47
CLN6-205ENST00000564846 CDK5Q00535 292 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 PRKCDQ05655 676 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 CD226Q15762 336 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 NDUFAF6Q330K2 333 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 CCDC103Q8IW40 242 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 CDK20Q8IZL9 346 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 SPARTQ8N0X7 666 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 POGLUT1Q8NBL1 392 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 PHOSPHO1Q8TCT1 267 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 C8orf44Q96CB5 159 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 ZNF426Q9BUY5 554 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 DDA1Q9BW61 102 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 SLC25A19Q9HC21 320 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 SNX5Q9Y5X3 404 aa17.96■□□□□ 0.47
CLN6-205ENST00000564846 TRBV11-1A0A0K0K1C0 115 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 OR6C70A6NIJ9 312 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 ALG1L2C9J202 215 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 STK17BO94768 372 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 JMJD7P0C870 316 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 GPR4P46093 362 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 SMSP52788 366 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 SNRPGP62308 76 aaKnown RBP17.95■□□□□ 0.46
CLN6-205ENST00000564846 SKP2Q13309 424 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 GINS1Q14691 196 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 BORAQ6PGQ7 559 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 APOOLQ6UXV4 268 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 MEX3DQ86XN8 651 aaKnown RBP17.95■□□□□ 0.46
CLN6-205ENST00000564846 KIF18BQ86Y91 864 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 CADM2Q8N3J6 435 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 CLDN22Q8N7P3 220 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 ZNF540Q8NDQ6 660 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 OR2Y1Q8NGV0 311 aa17.95■□□□□ 0.46
CLN6-205ENST00000564846 DNAJA4Q8WW22 397 aaPredicted RBP17.95■□□□□ 0.46
CLN6-205ENST00000564846 PTRH2Q9Y3E5 179 aaKnown RBP17.95■□□□□ 0.46
CLN6-205ENST00000564846 SH3D21A4FU49 640 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 CSO75390 466 aaKnown RBP17.94■□□□□ 0.46
CLN6-205ENST00000564846 KLF7O75840 302 aaPredicted RBP17.94■□□□□ 0.46
CLN6-205ENST00000564846 ZFAND5O76080 213 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 HTR1AP08908 422 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 JUNBP17275 347 aaPredicted RBP17.94■□□□□ 0.46
CLN6-205ENST00000564846 CTBP2P56545 445 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 EIF3IQ13347 325 aaKnown RBP17.94■□□□□ 0.46
CLN6-205ENST00000564846 EFR3AQ14156 821 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 KIRREL2Q6UWL6 708 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 LINC00114Q6XXX2 140 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 GATSQ8NAP1 163 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 OR8J1Q8NGP2 316 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 SGCDQ92629 289 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 OSTF1Q92882 214 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 ARSGQ96EG1 525 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 CCNL2Q96S94 520 aaPredicted RBP17.94■□□□□ 0.46
CLN6-205ENST00000564846 EGLN3Q9H6Z9 239 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 IL20Q9NYY1 176 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 NCDNQ9UBB6 729 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 PISDQ9UG56 409 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 NPFFR2Q9Y5X5 522 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 TEX51A0A1B0GUA7 166 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 MT-CO3P00414 261 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 UMODP07911 640 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 IFI30P13284 250 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 TTKP33981 857 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 SLC27A4Q6P1M0 643 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 TMPRSS11FQ6ZWK6 438 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 PFN4Q8NHR9 129 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 DGCR14Q96DF8 476 aaKnown RBP17.94■□□□□ 0.46
CLN6-205ENST00000564846 Q96MT0 163 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 DEPDC7Q96QD5 511 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 TUBA1CQ9BQE3 449 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 TBL1XR1Q9BZK7 514 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 PLA2G12AQ9BZM1 189 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 LAT2Q9GZY6 243 aa17.94■□□□□ 0.46
CLN6-205ENST00000564846 DSN1Q9H410 356 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms