RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SRYQ05066 204 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 CRYZQ08257 329 aaKnown RBP14.48□□□□□ -0.09
RAB40C-208ENST00000564703 NDUFAF6Q330K2 333 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 LIN52Q52LA3 116 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 ZNF311Q5JNZ3 666 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 C3P1Q6ZMU1 363 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 ARPINQ7Z6K5 226 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 SERPINA11Q86U17 422 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 TREML1Q86YW5 311 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 SLC30A8Q8IWU4 369 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 HIPK4Q8NE63 616 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 ZNF563Q8TA94 476 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 GPR119Q8TDV5 335 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 TMEM234Q8WY98 164 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 VKORC1Q9BQB6 163 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 SLC39A3Q9BRY0 314 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 SPATA9Q9BWV2 254 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 TRIM8Q9BZR9 551 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 KAT8Q9H7Z6 458 aaKnown RBP14.48□□□□□ -0.09
RAB40C-208ENST00000564703 MED17Q9NVC6 651 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 MEMO1Q9Y316 297 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 BSNQ9UPA5 3926 aa14.48□□□□□ -0.09
RAB40C-208ENST00000564703 OR2M5A3KFT3 312 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 PRORSD1PA6NEY8 169 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 NDUFAB1O14561 156 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 SEMA7AO75326 666 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 THBS1P07996 1170 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 LINGO3P0C6S8 592 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 UQCRBP14927 111 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 CPN1P15169 458 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 POU3F2P20265 443 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-208ENST00000564703 ME2P23368 584 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 ACVR2AP27037 513 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 RYKP34925 604 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 PGM1P36871 562 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 SLC6A8P48029 635 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 STARP49675 285 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 GFRA1P56159 465 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 EEFSECP57772 596 aaKnown RBP14.47□□□□□ -0.09
RAB40C-208ENST00000564703 SELPLGQ14242 412 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 MAPK11Q15759 364 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 BCL2A1Q16548 175 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 RABL3Q5HYI8 236 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 RPS26P11Q5JNZ5 115 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-208ENST00000564703 INTS11Q5TA45 600 aaKnown RBP14.47□□□□□ -0.09
RAB40C-208ENST00000564703 ZNF440Q8IYI8 595 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 OR5M1Q8NGP8 315 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 BCAS4Q8TDM0 211 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 ARSGQ96EG1 525 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 PIF1Q9H611 641 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 ZNF337Q9Y3M9 751 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 GPC6Q9Y625 555 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-208ENST00000564703 AP4B1Q9Y6B7 739 aa14.47□□□□□ -0.09
RAB40C-208ENST00000564703 MYO18BQ8IUG5 2567 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 DSPPQ9NZW4 1301 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 CENPVL1A0A0U1RR11 272 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 B4DXG7 233 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 H0Y3Z8 333 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 H3BML4 177 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 OIP5O43482 229 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 ZNF17P17021 662 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 RPS4Y1P22090 263 aaKnown RBP14.46□□□□□ -0.09
RAB40C-208ENST00000564703 ADH6P28332 368 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 NUDT2P50583 147 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 MNAT1P51948 309 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 SMSP52788 366 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 SKP2Q13309 424 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 QPRTQ15274 297 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 ADRM1Q16186 407 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 PLPPR5Q32ZL2 321 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 ERICH5Q6P6B1 374 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 VRK2Q86Y07 508 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 GTPBP8Q8N3Z3 284 aaPredicted RBP14.46□□□□□ -0.09
RAB40C-208ENST00000564703 MEIOBQ8N635 442 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 BHLHE22Q8NFJ8 381 aaPredicted RBP14.46□□□□□ -0.09
RAB40C-208ENST00000564703 OR10Q1Q8NGQ4 319 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 SLC26A7Q8TE54 656 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 WDYHV1Q96HA8 205 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 EXOSC3Q9NQT5 275 aaKnown RBP14.46□□□□□ -0.09
RAB40C-208ENST00000564703 SERINC1Q9NRX5 453 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 TAGLN3Q9UI15 199 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 ERRFI1Q9UJM3 462 aaPredicted RBP14.46□□□□□ -0.09
RAB40C-208ENST00000564703 SLC13A4Q9UKG4 626 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 PRDM4Q9UKN5 801 aa14.46□□□□□ -0.09
RAB40C-208ENST00000564703 DIDO1Q9BTC0 2240 aaKnown RBP14.45□□□□□ -0.1
RAB40C-208ENST00000564703 C7orf72A4D263 438 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 CLDN24A6NM45 220 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 PABPC4LP0CB38 370 aaKnown RBP14.45□□□□□ -0.1
RAB40C-208ENST00000564703 GP1BBP13224 206 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 AQP1P29972 269 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 B3GALT5-AS1P59052 145 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 COPZ1P61923 177 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 VMACQ2NL98 169 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 EMC4Q5J8M3 183 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 PDSS1Q5T2R2 415 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 MRPL2Q5T653 305 aaKnown RBP14.45□□□□□ -0.1
RAB40C-208ENST00000564703 C1orf185Q5T7R7 199 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 HACD2Q6Y1H2 254 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 B3GNT6Q6ZMB0 384 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 ZNF550Q7Z398 422 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms