RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CPA2P48052 419 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 ZNF136P52737 540 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 SUCLG1P53597 346 aaKnown RBP12.32□□□□□ -0.44
CNOT1-206ENST00000564557 CLDN15P56746 228 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 CLDN20P56880 219 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 RAC1P63000 192 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 MYBPHQ13203 477 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.32□□□□□ -0.44
CNOT1-206ENST00000564557 BLOC1S3Q6QNY0 202 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 CBLN3Q6UW01 205 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 OR5W2Q8NH69 310 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 THOC1Q96FV9 657 aaKnown RBP12.32□□□□□ -0.44
CNOT1-206ENST00000564557 REXO5Q96IC2 774 aaKnown RBP12.32□□□□□ -0.44
CNOT1-206ENST00000564557 TRNT1Q96Q11 434 aaKnown RBP12.32□□□□□ -0.44
CNOT1-206ENST00000564557 SIKE1Q9BRV8 207 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 TMUB1Q9BVT8 246 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 LAT2Q9GZY6 243 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 RAD21L1Q9H4I0 556 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 TPT1P8Q9HAU6 139 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 NPHS2Q9NP85 383 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 TIGARQ9NQ88 270 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.32□□□□□ -0.44
CNOT1-206ENST00000564557 THUMPD1Q9NXG2 353 aaKnown RBP12.32□□□□□ -0.44
CNOT1-206ENST00000564557 CCDC167Q9P0B6 97 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 CLCF1Q9UBD9 225 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 DCTN4Q9UJW0 460 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 MCTS1Q9ULC4 181 aaKnown RBP12.32□□□□□ -0.44
CNOT1-206ENST00000564557 SLC35A3Q9Y2D2 325 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 UTP20O75691 2785 aaKnown RBP12.31□□□□□ -0.44
CNOT1-206ENST00000564557 INTS1Q8N201 2190 aaKnown RBP12.31□□□□□ -0.44
CNOT1-206ENST00000564557 C7orf72A4D263 438 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 SYT5O00445 386 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 NR5A2O00482 541 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 KIAA0513O60268 411 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 H6PDO95479 791 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 PLGP00747 810 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-206ENST00000564557 OPN1LWP04000 364 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 CRHP06850 196 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 GUSBP08236 651 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ZCCHC18P0CG32 403 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 PGCP20142 388 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ADH6P28332 368 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 CHRNEQ04844 493 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 TFF3Q07654 80 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 SQLEQ14534 574 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 PON3Q15166 354 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 TMEM44Q2T9K0 475 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 AGKQ53H12 422 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 TYW3Q6IPR3 259 aaKnown RBP12.31□□□□□ -0.44
CNOT1-206ENST00000564557 LRRC74BQ6ZQY2 392 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ESPNLQ6ZVH7 1005 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 OLIG3Q7RTU3 272 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ADGRE4PQ86SQ3 457 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 KIF18BQ86Y91 864 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-206ENST00000564557 GCNT2Q8N0V5 402 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 LILRA2Q8N149 483 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 CNEP1R1Q8N9A8 125 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 RELL2Q8NC24 303 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ATP6V1C2Q8NEY4 427 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 FBXO27Q8NI29 283 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ZNF563Q8TA94 476 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 GPR119Q8TDV5 335 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ZFP90Q8TF47 636 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 TMEM234Q8WY98 164 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 RNASE6Q93091 150 aaKnown RBP12.31□□□□□ -0.44
CNOT1-206ENST00000564557 SPDL1Q96EA4 605 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 MRGPRX4Q96LA9 322 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ZNF559Q9BR84 538 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 THUMPD3Q9BV44 507 aaKnown RBP12.31□□□□□ -0.44
CNOT1-206ENST00000564557 PIGMQ9H3S5 423 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 TMEM185BQ9H7F4 350 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 MTHFD2LQ9H903 347 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-206ENST00000564557 CALML5Q9NZT1 146 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 P2RX2Q9UBL9 471 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ICAM5Q9UMF0 924 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 ZNF175Q9Y473 711 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 PKDREJQ9NTG1 2253 aa12.31□□□□□ -0.44
CNOT1-206ENST00000564557 A0A0G2JND7 137 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 H0YC42 278 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 EDF1O60869 148 aaKnown RBP12.3□□□□□ -0.44
CNOT1-206ENST00000564557 TGM6O95932 706 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 LINGO3P0C6S8 592 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 TROVE2P10155 538 aaKnown RBP eCLIP12.3□□□□□ -0.44
CNOT1-206ENST00000564557 IL7RP16871 459 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 ELK4P28324 431 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 SFTPDP35247 375 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 MRPL19P49406 292 aaKnown RBP12.3□□□□□ -0.44
CNOT1-206ENST00000564557 ATP4BP51164 291 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 TPD52P55327 224 aaPredicted RBP12.3□□□□□ -0.44
CNOT1-206ENST00000564557 DSTNP60981 165 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 FOXF1Q12946 379 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 FOXF2Q12947 444 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 FGFBP1Q14512 234 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 QPRTQ15274 297 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 SYPL1Q16563 259 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 NDUFAF6Q330K2 333 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 HBMQ6B0K9 141 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 GTF2IRD2BQ6EKJ0 949 aa12.3□□□□□ -0.44
CNOT1-206ENST00000564557 SLC2A7Q6PXP3 512 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms