RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TUBA3EQ6PEY2 450 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 LINC00696Q6ZRV3 163 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 PIWIL3Q7Z3Z3 882 aaKnown RBP11.81□□□□□ -0.52
SPG7-209ENST00000564047 MARCH3Q86UD3 253 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 COMTD1Q86VU5 262 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 CARM1Q86X55 608 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 CYP4Z2PQ8N1L4 340 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 FAM71CQ8NEG0 241 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 PHOSPHO1Q8TCT1 267 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 SNRNP27Q8WVK2 155 aaKnown RBP11.81□□□□□ -0.52
SPG7-209ENST00000564047 C7orf34Q96L11 122 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 CHID1Q9BWS9 393 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 METTL7AQ9H8H3 244 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 EXOSC3Q9NQT5 275 aaKnown RBP11.81□□□□□ -0.52
SPG7-209ENST00000564047 C8orf4Q9NR00 106 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 SDHAF3Q9NRP4 125 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 LRRK2Q5S007 2527 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 ZNF264O43296 627 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 HNRNPRO43390 633 aaKnown RBP11.8□□□□□ -0.52
SPG7-209ENST00000564047 EIF4E2O60573 245 aaKnown RBP11.8□□□□□ -0.52
SPG7-209ENST00000564047 WDPCPO95876 746 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 FABP3P05413 133 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 UBL4AP11441 157 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 FCGR1AP12314 374 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 ITGA2P17301 1181 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 TNFRSF1BP20333 461 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 PTGDSP41222 190 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 OR1E2P47887 323 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 ST13P50502 369 aaKnown RBP11.8□□□□□ -0.52
SPG7-209ENST00000564047 GAS1P54826 345 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 VLDLRP98155 873 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 C17orf67Q0P5P2 114 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 RAPSNQ13702 412 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 LRRC36Q1X8D7 754 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 IQCCQ4KMZ1 466 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 SLC30A6Q6NXT4 461 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 IGFL2Q6UWQ7 119 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 ZNF550Q7Z398 422 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 ZNF227Q86WZ6 799 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 ZDHHC21Q8IVQ6 265 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 ZNF440Q8IYI8 595 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 PACRGLQ8N7B6 248 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 OR4D11Q8NGI4 311 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 CNOT9Q92600 299 aaKnown RBP11.8□□□□□ -0.52
SPG7-209ENST00000564047 HAS2Q92819 552 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 NTNG2Q96CW9 530 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 OSBPL11Q9BXB4 747 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 ANGPTL4Q9BY76 406 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 RTN4RQ9BZR6 473 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 AMBRA1Q9C0C7 1298 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 FAM192AQ9GZU8 254 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 LAT2Q9GZY6 243 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 TIMMDC1Q9NPL8 285 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 ANKRD10Q9NXR5 420 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 DNAJB12Q9NXW2 375 aaKnown RBP11.8□□□□□ -0.52
SPG7-209ENST00000564047 KLRF1Q9NZS2 232 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 LRFN1Q9P244 771 aa11.8□□□□□ -0.52
SPG7-209ENST00000564047 DPPA5A6NC42 116 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 OR5H15A6NDH6 313 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 M0R3H8 397 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 GTPBP1O00178 669 aaKnown RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 SCO2O43819 266 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 BCAS1O75363 584 aaPredicted RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 NEURL1O76050 574 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 SNX4O95219 450 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 P04436 131 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 UBTFL6P0CB48 400 aaPredicted RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 CCL3P10147 92 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 RNF144AP50876 292 aaPredicted RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 ZNF136P52737 540 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 RGS8P57771 180 aaPredicted RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 SKP2Q13309 424 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 PDK3Q15120 406 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 COLEC12Q5KU26 742 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 BORAQ6PGQ7 559 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 MDGA2Q7Z553 956 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 TSEN54Q7Z6J9 526 aaKnown RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 LACC1Q8IV20 430 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 GATSQ8NAP1 163 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 TOR1AIP2Q8NFQ8 470 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 OR6T1Q8NGN1 323 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 VANGL1Q8TAA9 524 aaPredicted RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 FRMD6Q96NE9 622 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 ZNF300Q96RE9 604 aaPredicted RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 ZNF347Q96SE7 839 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 SMAD5Q99717 465 aaKnown RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 WFDC6Q9BQY6 131 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 SACM1LQ9NTJ5 587 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 NDUFAF4Q9P032 175 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 PCDHGA9Q9Y5G4 932 aaKnown RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 ENPP4Q9Y6X5 453 aa11.79□□□□□ -0.52
SPG7-209ENST00000564047 TLN1Q9Y490 2541 aaKnown RBP11.79□□□□□ -0.52
SPG7-209ENST00000564047 IGLV3-32A0A0A0MS00 114 aa11.78□□□□□ -0.52
SPG7-209ENST00000564047 hCG_2039718K7EN88 272 aa11.78□□□□□ -0.52
SPG7-209ENST00000564047 AP3D1O14617 1153 aa11.78□□□□□ -0.52
SPG7-209ENST00000564047 FRS3O43559 492 aa11.78□□□□□ -0.52
SPG7-209ENST00000564047 DPM1O60762 260 aa11.78□□□□□ -0.52
SPG7-209ENST00000564047 FMO6PO60774 539 aa11.78□□□□□ -0.52
SPG7-209ENST00000564047 TIPRLO75663 272 aa11.78□□□□□ -0.52
SPG7-209ENST00000564047 LINGO3P0C6S8 592 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms