RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 POU2F1P14859 743 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 ENDOUP21128 410 aaKnown RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 CAPGP40121 348 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 SOX3P41225 446 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 COPZ1P61923 177 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 ZNF770Q6IQ21 691 aaPredicted RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 ZNF613Q6PF04 617 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 ZNF730Q6ZMV8 503 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 RRM2BQ7LG56 351 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 LINC00471Q8N535 108 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 ADAMTS17Q8TE56 1095 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 TTC9Q92623 222 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 GTPBP3Q969Y2 492 aaKnown RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 SH3YL1Q96HL8 342 aaPredicted RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 MBOAT4Q96T53 435 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 NIPSNAP1Q9BPW8 284 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 RTN4RQ9BZR6 473 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 PAPOLBQ9NRJ5 636 aaKnown RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 POFUT2Q9Y2G5 429 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 YARS2Q9Y2Z4 477 aaKnown RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 SPTBN2O15020 2390 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 HCRTR2O43614 444 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 THY1P04216 161 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 SERPINA7P05543 415 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 LINGO3P0C6S8 592 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 LIFP15018 202 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 UGT2B15P54855 530 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 ZNF117Q03924 483 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 Q0VFX4 171 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 KCNAB2Q13303 367 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 SLC36A3Q495N2 470 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 CBLN3Q6UW01 205 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 LYPD8Q6UX82 237 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 NUP54Q7Z3B4 507 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 RPS19BP1Q86WX3 136 aaKnown RBP20.1■□□□□ 0.81
LINC01960-201ENST00000563759 NKAIN4Q8IVV8 208 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 ZNF555Q8NEP9 628 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 TOR1AIP2Q8NFQ8 470 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 HGDQ93099 445 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 IP6K3Q96PC2 410 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 NODALQ96S42 347 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 RIBC2Q9H4K1 309 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 CDCP1Q9H5V8 836 aa20.1■□□□□ 0.81
LINC01960-201ENST00000563759 OIP5O43482 229 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 CBLP22681 906 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 RTP5Q14D33 572 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 NTRK2Q16620 822 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 OPN5Q6U736 354 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 LSMEM1Q8N8F7 131 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 OR10G3Q8NGC4 313 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 ACOT11Q8WXI4 607 aaPredicted RBP20.09■□□□□ 0.81
LINC01960-201ENST00000563759 ASB15Q8WXK1 588 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 NXPE2Q96DL1 559 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 ANKRD60Q9BZ19 345 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 KLRF1Q9NZS2 232 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 SELENONQ9NZV5 590 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 MGAT4BQ9UQ53 548 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 A0A087WUU8 490 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 A0A0B4J2E0 115 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 A0A1B0GWA3 101 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 A0A1B0GX12 115 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 H0YAE9 185 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 MAN1A2O60476 641 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 ADAP00813 363 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 GASTP01350 101 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 RPSAP08865 295 aaKnown RBP20.09■□□□□ 0.81
LINC01960-201ENST00000563759 SDHBP21912 280 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 SSR4P51571 173 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 CHAF1BQ13112 559 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 CAMK2BQ13554 666 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 ALG10BQ5I7T1 473 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 PGBD2Q6P3X8 592 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 APLFQ8IW19 511 aaPredicted RBP20.09■□□□□ 0.81
LINC01960-201ENST00000563759 CHERPQ8IWX8 916 aaKnown RBP20.09■□□□□ 0.81
LINC01960-201ENST00000563759 TMEM255BQ8WV15 326 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 LAT2Q9GZY6 243 aa20.09■□□□□ 0.81
LINC01960-201ENST00000563759 CHP2O43745 196 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 GMFGO60234 142 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 EIF4E2O60573 245 aaKnown RBP20.08■□□□□ 0.81
LINC01960-201ENST00000563759 OR6B1O95007 311 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 IFNGR2P38484 337 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 MLF1P58340 268 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 VASH2Q86V25 355 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 MISPQ8IVT2 679 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 SIRT6Q8N6T7 355 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 METTL7AQ9H8H3 244 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 FAM118AQ9NWS6 357 aa20.08■□□□□ 0.81
LINC01960-201ENST00000563759 MED13Q9UHV7 2174 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 NTN1O95631 604 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 GNAO1P09471 354 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 PTNP21246 168 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 SLC6A8P48029 635 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 ST13P50502 369 aaKnown RBP20.07■□□□□ 0.8
LINC01960-201ENST00000563759 ADARB1P78563 741 aaKnown RBP20.07■□□□□ 0.8
LINC01960-201ENST00000563759 TTC23Q5W5X9 447 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 MARVELD2Q8N4S9 558 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 TMEM156Q8N614 296 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 CPAMD8Q8IZJ3 1885 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 C17orf51A8MQB3 221 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 TP53I11O14683 189 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 444.4 ms