RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 CLPTM1LQ96KA5 538 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 SLC46A1Q96NT5 459 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ZNF607Q96SK3 696 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CRB3Q9BUF7 120 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 EFHD1Q9BUP0 239 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ACTRT3Q9BYD9 372 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CHST8Q9H2A9 424 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CXorf36Q9H7Y0 433 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 TRIM45Q9H8W5 580 aaPredicted RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 WDR54Q9H977 334 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 POLR1BQ9H9Y6 1135 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CXorf21Q9HAI6 301 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CACYBPQ9HB71 228 aaKnown RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 ADAP2Q9NPF8 381 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 NECTIN3Q9NQS3 549 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 DDX18Q9NVP1 670 aaKnown RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 CMTM6Q9NX76 183 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 SLC25A37Q9NYZ2 338 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CALML5Q9NZT1 146 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ACTR3BQ9P1U1 418 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 RNF7Q9UBF6 113 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 COPS7AQ9UBW8 275 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PRODH2Q9UF12 536 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 C3orf18Q9UK00 162 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 KCND3Q9UK17 655 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 C19orf53Q9UNZ5 99 aaPredicted RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 LIPT1Q9Y234 373 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 POMPQ9Y244 141 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 GMEB1Q9Y692 573 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 RIF1Q5UIP0 2472 aaKnown RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 A0A0G2JPF8 293 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 PRORSD1PA6NEY8 169 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 OR2W5A6NFC9 320 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 CGB1A6NKQ9 187 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 AQP12BA6NM10 295 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 OR6C76A6NM76 312 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 FAM220BPB1ANY3 271 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 HNRNPCL2B2RXH8 293 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 IDSB3KWA1 339 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 HNRNPCL3B7ZW38 293 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 C21orf140B9A014 251 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 STMND1H3BQB6 276 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 FXYD1O00168 92 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 UPK1AO00322 258 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 CXCR6O00574 342 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 ASNA1O43681 348 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 PRAMEF2O60811 474 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 FKBP6O75344 327 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 CREG1O75629 220 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 SERPINB7O75635 380 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 PDE9AO76083 593 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 AK1P00568 194 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 HMGN2P05204 90 aaKnown RBP4.26□□□□□ -1.73
CDR2-203ENST00000563573 CELA2AP08217 269 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 HNRNPCL4P0DMR1 293 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 OR12D1P0DN82 309 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 NR2F1P10589 423 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 ICAM2P13598 275 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 ETFAP13804 333 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 PPP3CBP16298 524 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 HOXB6P17509 224 aaKnown RBP4.26□□□□□ -1.73
CDR2-203ENST00000563573 PTPN6P29350 595 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 PSMD4P55036 377 aaKnown RBP4.26□□□□□ -1.73
CDR2-203ENST00000563573 CLDN6P56747 220 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 DCAF7P61962 342 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 AP2B1P63010 937 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 ELF3P78545 371 aaPredicted RBP4.26□□□□□ -1.73
CDR2-203ENST00000563573 CDK6Q00534 326 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 RHAGQ02094 409 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 TLE1Q04724 770 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 CEACAM7Q14002 265 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 SCARB2Q14108 478 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 SELPLGQ14242 412 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 FLOT2Q14254 428 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 LASP1Q14847 261 aaKnown RBP4.26□□□□□ -1.73
CDR2-203ENST00000563573 NCF4Q15080 339 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 SRSF7Q16629 238 aaKnown RBP eCLIP4.26□□□□□ -1.735e-9■■■■■ 29.6
CDR2-203ENST00000563573 ZNF630Q2M218 657 aaPredicted RBP4.26□□□□□ -1.73
CDR2-203ENST00000563573 GTDC1Q4AE62 458 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 GPAT3Q53EU6 434 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 TRMT12Q53H54 448 aaKnown RBP4.26□□□□□ -1.73
CDR2-203ENST00000563573 SFT2D3Q587I9 215 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 ZNF628Q5EBL2 1059 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.26□□□□□ -1.73
CDR2-203ENST00000563573 GCNT6Q5T4J0 391 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 SAXO2Q658L1 398 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 FAAH2Q6GMR7 532 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 REEP3Q6NUK4 255 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 CDC73Q6P1J9 531 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 TMEM205Q6UW68 189 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 SHISA6Q6ZSJ9 500 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 COX15Q7KZN9 410 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 SLC29A4Q7RTT9 530 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 C16orf62Q7Z3J2 963 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 PATL1Q86TB9 770 aaKnown RBP4.26□□□□□ -1.73
CDR2-203ENST00000563573 SPATA24Q86W54 205 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 CALHM3Q86XJ0 350 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 RNF130Q86XS8 419 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 KRT73Q86Y46 540 aa4.26□□□□□ -1.73
CDR2-203ENST00000563573 AQP12AQ8IXF9 295 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms