RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 OR2B2Q9GZK3 357 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 DEFB127Q9H1M4 99 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 MUC13Q9H3R2 512 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 LDAHQ9H6V9 325 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 EXO5Q9H790 373 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 RLIMQ9NVW2 624 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 TAS2R10Q9NYW0 307 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 BAG5Q9UL15 447 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 ICAM5Q9UMF0 924 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 SNX13Q9Y5W8 968 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 IGSF10Q6WRI0 2623 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 ATRXP46100 2492 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 CFAP73A6NFT4 308 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 B8ZZF3 427 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 SYT5O00445 386 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 BCAS1O75363 584 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-207ENST00000563109 HPNP05981 417 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 NCK1P16333 377 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 HK1P19367 917 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 ELOAQ14241 798 aaKnown RBP17.1■□□□□ 0.33
RAB40C-207ENST00000563109 CYBRD1Q53TN4 286 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 CMPK2Q5EBM0 449 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 ZNF324BQ6AW86 544 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-207ENST00000563109 GLYATQ6IB77 296 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 CLIP4Q8N3C7 705 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 ZNF843Q8N446 348 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 FAM83FQ8NEG4 500 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-207ENST00000563109 LZICQ8WZA0 190 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 PROX1Q92786 737 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 SLC35B4Q969S0 331 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 ARSGQ96EG1 525 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 GPR137Q96N19 417 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 LRMDAQ9H2I8 198 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 ACKR4Q9NPB9 350 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 RPS6KA6Q9UK32 745 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 VDAC3Q9Y277 283 aa17.1■□□□□ 0.33
RAB40C-207ENST00000563109 MRPS18CQ9Y3D5 142 aaKnown RBP17.1■□□□□ 0.33
RAB40C-207ENST00000563109 BSNQ9UPA5 3926 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 B4DXG7 233 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 ARPC2O15144 300 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 C8BP07358 591 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 CELA3AP09093 270 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 LINGO3P0C6S8 592 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 TCEA1P23193 301 aaKnown RBP17.09■□□□□ 0.33
RAB40C-207ENST00000563109 MST1P26927 711 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 RYKP34925 604 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 KCNJ5P48544 419 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 RGS8P57771 180 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-207ENST00000563109 NCALDP61601 193 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 FXNQ16595 210 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 KRTCAP3Q53RY4 240 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 RAET1LQ5VY80 246 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 YRDCQ86U90 279 aaKnown RBP17.09■□□□□ 0.33
RAB40C-207ENST00000563109 GHDCQ8N2G8 530 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 ZNF563Q8TA94 476 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 TMEM234Q8WY98 164 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 ZBTB8AQ96BR9 441 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 CCDC124Q96CT7 223 aaKnown RBP17.09■□□□□ 0.33
RAB40C-207ENST00000563109 SLX1AQ9BQ83 275 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 MED17Q9NVC6 651 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 SLC9A8Q9Y2E8 581 aa17.09■□□□□ 0.33
RAB40C-207ENST00000563109 TRGV5A0A0B4J1U4 118 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 TPST1O60507 370 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 HCN1O60741 890 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 ZNF682O95780 498 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 SERPINA1P01009 418 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 EDN3P14138 238 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 CD247P20963 164 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 MSX2P35548 267 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-207ENST00000563109 PLAURQ03405 335 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 QPRTQ15274 297 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 PLPPR5Q32ZL2 321 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 GLYR1Q49A26 553 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-207ENST00000563109 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 WIPI1Q5MNZ9 446 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-207ENST00000563109 ARSKQ6UWY0 536 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 RANBP3LQ86VV4 465 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-207ENST00000563109 GPR119Q8TDV5 335 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 TPD52L3Q96J77 140 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 CLPTM1LQ96KA5 538 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 NSMCE2Q96MF7 247 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 SFXN2Q96NB2 322 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 BARD1Q99728 777 aaKnown RBP17.08■□□□□ 0.32
RAB40C-207ENST00000563109 PIGQQ9BRB3 760 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 PCDHAC1Q9H158 963 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 SLC6A15Q9H2J7 730 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 GORASP2Q9H8Y8 452 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 SAMD4AQ9UPU9 718 aaKnown RBP17.08■□□□□ 0.32
RAB40C-207ENST00000563109 RPH3AQ9Y2J0 694 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-207ENST00000563109 CHST2Q9Y4C5 530 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 LIPGQ9Y5X9 500 aa17.08■□□□□ 0.32
RAB40C-207ENST00000563109 GSC2O15499 205 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 C1QL1O75973 258 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 LGI1O95970 557 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 IGHG3P01860 377 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 FESP07332 822 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 GKN3PP0CG01 181 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 ZNF17P17021 662 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 EIF1P41567 113 aaKnown RBP17.07■□□□□ 0.32
RAB40C-207ENST00000563109 TDGF1P3P51864 188 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms